Mercurial > repos > saket-choudhary > eqtl_tools
comparison panama.xml @ 1:7265ecc0f879
Moving the files to proper hiererachy levels
| author | Saket Choudhary<saketkc@gmail.com> |
|---|---|
| date | Sun, 16 Jun 2013 12:24:55 +0530 |
| parents | |
| children | 54dddd7b44d0 |
comparison
equal
deleted
inserted
replaced
| 0:2cb13deb38ad | 1:7265ecc0f879 |
|---|---|
| 1 <tool id="panama1" name="panama" version="1.0.0"> | |
| 2 <requirements> | |
| 3 <requirement type="package">panama</requirement> | |
| 4 </requirements> | |
| 5 <description>eQTL Analysis using PANAMA(http://ml.sheffield.ac.uk/qtl/panama/)</description> | |
| 6 <command interpreter="python"> | |
| 7 panama_run.py --exp_data=$expression_data --snp_data=$snp_data --output1=$output1 | |
| 8 </command> | |
| 9 <inputs> | |
| 10 <param name="expression_data" type="data" format="text" label="Select Expression Data" /> | |
| 11 <param name="snp_data" type="data" format="text" label="Select SNP data" /> | |
| 12 </inputs> | |
| 13 <outputs> | |
| 14 <data name="output1" format="text" /> | |
| 15 </outputs> | |
| 16 <tests> | |
| 17 <test> | |
| 18 <param name="expression_data" value="sim_expr.csv" /> | |
| 19 <param name="snp_data" value="sim_snps.csv" /> | |
| 20 <output name="output1" file="PANAMA_results.csv" /> | |
| 21 </test> | |
| 22 </tests> | |
| 23 | |
| 24 | |
| 25 </tool> |