Mercurial > repos > saket-choudhary > eqtl_tools
comparison panama.xml @ 8:168b9ff24bcb default tip
Merge multiple heads.
author | Dave Bouvier <dave@bx.psu.edu> |
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date | Mon, 27 Jan 2014 14:07:41 -0500 |
parents | bef89654259a 88a4d4c31bb6 |
children |
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7:bef89654259a | 8:168b9ff24bcb |
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1 <tool id="panama1" name="panama" version="1.0.0"> | |
2 <requirements> | |
3 <requirement type="package" version="0.4">panama</requirement> | |
4 </requirements> | |
5 <description>eQTL Analysis using PANAMA(http://ml.sheffield.ac.uk/qtl/panama/)</description> | |
6 <command interpreter="python"> | |
7 panama_run.py --exp_data=$expression_data --snp_data=$snp_data --output1=$output1 | |
8 </command> | |
9 <inputs> | |
10 <param name="expression_data" type="data" format="text" label="Select Expression Data" /> | |
11 <param name="snp_data" type="data" format="text" label="Select SNP data" /> | |
12 </inputs> | |
13 <outputs> | |
14 <data name="output1" format="text" /> | |
15 </outputs> | |
16 <tests> | |
17 <test> | |
18 <param name="expression_data" value="sim_expr.csv" /> | |
19 <param name="snp_data" value="sim_snps.csv" /> | |
20 <output name="output1" file="PANAMA_results.csv" /> | |
21 </test> | |
22 </tests> | |
23 | |
24 | |
25 </tool> |