Mercurial > repos > saskia-hiltemann > annovar

comparison tool_dependencies.xml~ @ 1:7d9353127f8a draft

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tool_data_table_conf.xml.sample fix
author saskia-hiltemann
date Tue, 05 Nov 2013 07:16:32 -0500
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0:d3a72e55deca 1:7d9353127f8a
1 <?xml version="1.0"?>
2 <tool_dependency>
3 <package name="cgatools17" version="1">
4 <install version="1.0">
5 <actions>
6 <action type="download_by_url">http://sourceforge.net/projects/cgatools/files/1.7.1/cgatools-1.7.1.5-linux_binary-x86_64.tar.gz</action>
7 <action type="shell_command"> chmod a+x bin/cgatools</action>
8 <action type="move_file">
9 <source>bin/cgatools</source>
10 <destination>$INSTALL_DIR/bin</destination>
11 </action>
12 <action type="set_environment">
13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
14 <environment_variable name="PATH" action="prepend_to">$REPOSITORY_INSTALL_DIR</environment_variable>
15 </action>
16 </actions>
17 </install>
18 <readme>
19 Downloads and installs the cgatools binary.
20 </readme>
21 </package>
22 </tool_dependency>
23