Mercurial > repos > saskia-hiltemann > annovar
comparison tools/annovar/annovar.xml @ 9:f7ff063c738e draft default tip
bugfix for COSMIC70 not giving output
author | saskia-hiltemann |
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date | Fri, 04 Mar 2016 11:56:10 -0500 |
parents | d6af2a78617f |
children |
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8:d6af2a78617f | 9:f7ff063c738e |
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18 --cosmic63 "${cosmic63}" | 18 --cosmic63 "${cosmic63}" |
19 --cosmic64 "${cosmic64}" | 19 --cosmic64 "${cosmic64}" |
20 --cosmic65 "${cosmic65}" | 20 --cosmic65 "${cosmic65}" |
21 --cosmic67 "${cosmic67}" | 21 --cosmic67 "${cosmic67}" |
22 --cosmic68 "${cosmic68}" | 22 --cosmic68 "${cosmic68}" |
23 --cosmic70 "${cosmic70}" | |
23 --outall "${annotated}" | 24 --outall "${annotated}" |
24 --outinvalid "${invalid}" | 25 --outinvalid "${invalid}" |
25 --dorunannovar "${dorun}" | 26 --dorunannovar "${dorun}" |
26 --inputfile "${infile}" | 27 --inputfile "${infile}" |
27 --buildver "${reference.fields.dbkey}" | 28 --buildver "${reference.fields.dbkey}" |