diff tool-data/cgatools.loc.sample @ 1:3a2e0f376f26 draft

Minor change to tv2vcf.xml to allow for workflow automation
author dgdekoning
date Wed, 21 Oct 2015 10:09:15 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool-data/cgatools.loc.sample	Wed Oct 21 10:09:15 2015 -0400
@@ -0,0 +1,6 @@
+# loc file for all files needed by CGATools
+#
+# <columns> value, dbkey, name, crr_path, repmask_path, genedata_path, segdup_path, calibration_root </columns>
+
+#hg18	hg18	build 36 [Human Mar. 2006 (NCBI36/hg18)]	/path/to/build36.crr	/path/to/rmsk36.tsv	/path/to/gene36.tsv	/path/to/segdup36.tsv	/path/to/var-calibration-v2/	
+#hg19	hg19	build 37 [Human Feb. 2009 (GRCh37/hg19)]	/path/to/build37.crr	/path/to/rmsk37.tsv	/path/to/gene37.tsv	/path/to/segdup37.tsv	/path/to/var-calibration-v2/