Mercurial > repos > saskia-hiltemann > file_manipulation
comparison getcolumnnames.py @ 0:e77c9484b2d0 draft default tip
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| author | saskia-hiltemann |
|---|---|
| date | Thu, 22 Oct 2015 09:18:30 -0400 |
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| children |
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| -1:000000000000 | 0:e77c9484b2d0 |
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| 1 import os, sys | |
| 2 import fnmatch | |
| 3 import csv | |
| 4 | |
| 5 def get_headers(inputfile): | |
| 6 columnList=[] | |
| 7 #line=inputfile.readlines()[0] | |
| 8 filename=inputfile.get_file_name() | |
| 9 try: | |
| 10 f = open(filename) | |
| 11 line=f.readline() | |
| 12 while(line[0]=='#' or (not line.strip())): #remove header (starting with hash sign and empty lines to get to headerline | |
| 13 line=f.readline() | |
| 14 line = line.strip() | |
| 15 i=1; | |
| 16 for col in line.split("\t"): | |
| 17 label=str(i)+': '+str(col) | |
| 18 columnList.append([label,label,False]) | |
| 19 i+=1 | |
| 20 | |
| 21 except IOError as e: | |
| 22 pass | |
| 23 | |
| 24 return columnList | |
| 25 | |
| 26 | |
| 27 | |
| 28 | |
| 29 | |
| 30 |