annotate README.md @ 9:7300ed4c1481 draft default tip

Uploaded
author saskia-hiltemann
date Mon, 04 Sep 2017 10:49:00 -0400
parents a4813532bbc6
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
2
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
1 iReport
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
2 =======
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
3
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
4 iReport Galaxy tool - HTML reporting in Galaxy
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
5
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
6 install to your Galaxy via the main tool shed: http://toolshed.g2.bx.psu.edu/
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
7
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
8 direct repository link: http://saskia-hiltemann@toolshed.g2.bx.psu.edu/repos/saskia-hiltemann/ireport
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
9
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
10 email: s.hiltemann@erasmusmc.nl
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
11
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
12
4
a4813532bbc6 Added MarkDown support
saskia-hiltemann
parents: 2
diff changeset
13 Installation Instructions
a4813532bbc6 Added MarkDown support
saskia-hiltemann
parents: 2
diff changeset
14 --------------------------
9
7300ed4c1481 Uploaded
saskia-hiltemann
parents: 4
diff changeset
15 This package uses (but does not install) Bash, Perl and Python.
2
e8755431a0cd fixed missing dependencies
saskia-hiltemann
parents:
diff changeset
16
9
7300ed4c1481 Uploaded
saskia-hiltemann
parents: 4
diff changeset
17 If Pandoc ((johnmacfarlane.net/pandoc/index.html)) is installed on your system PATH (command 'pandoc'), any MarkDown text items will be rendered using Pandoc (allows many markdown syntax extensions).
7300ed4c1481 Uploaded
saskia-hiltemann
parents: 4
diff changeset
18 If Pandoc is not present, a simple markdown conversion script is used (only handles vanilla syntax).