comparison iReport.sh @ 3:4a6ebda2a3ae draft

fixed tool dependency issue
author saskia-hiltemann
date Tue, 30 Sep 2014 09:56:12 -0400
parents e8755431a0cd
children a4813532bbc6
comparison
equal deleted inserted replaced
2:e8755431a0cd 3:4a6ebda2a3ae
1 #!/bin/bash 1 #!/bin/bash
2 #repositorypath="/mnt/galaxyTools/shed_tools/toolshed.nbic.nl/repos/saskia-hiltemann/ireport/71dc132e9bb2/ireport" # TODO: dependency 2 #repositorypath="/mnt/galaxyTools/shed_tools/toolshed.nbic.nl/repos/saskia-hiltemann/ireport/71dc132e9bb2/ireport" # TODO: dependency
3 source "${repositorypath}/createHTML.sh" 3
4 4
5 echo "allparams: $@" 5 echo "allparams: $@"
6 function usage() { echo "Oops!"; } 6 function usage() { echo "Oops!"; }
7 7
8 8
29 *) break;; 29 *) break;;
30 esac 30 esac
31 shift 31 shift
32 done 32 done
33 33
34 34 source "${repositorypath}/createHTML.sh"
35 mkdir $galaxypath 35 mkdir $galaxypath
36 36
37 tabs=${tabs//,/ }; tabs=${tabs/ /} 37 tabs=${tabs//,/ }; tabs=${tabs/ /}
38 items=${items//,/ }; items=${items/ /} 38 items=${items//,/ }; items=${items/ /}
39 title=${title//--/} 39 title=${title//--/}