Mercurial > repos > saskia-hiltemann > ireport

comparison iReport.sh @ 2:e8755431a0cd draft

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fixed missing dependencies
author saskia-hiltemann
date Tue, 30 Sep 2014 09:47:14 -0400
parents 440f4aa3db97
children 4a6ebda2a3ae
comparison
equal deleted inserted replaced
1:440f4aa3db97 2:e8755431a0cd
1 #!/bin/bash 1 #!/bin/bash
2 repositorypath="/mnt/galaxyTools/shed_tools/toolshed.nbic.nl/repos/saskia-hiltemann/ireport/71dc132e9bb2/ireport" # TODO: dependency 2 #repositorypath="/mnt/galaxyTools/shed_tools/toolshed.nbic.nl/repos/saskia-hiltemann/ireport/71dc132e9bb2/ireport" # TODO: dependency
3 source "${repositorypath}/createHTML.sh" 3 source "${repositorypath}/createHTML.sh"
4 4
5 echo "allparams: $@" 5 echo "allparams: $@"
6 function usage() { echo "Oops!"; } 6 function usage() { echo "Oops!"; }
7 7
13 [ $# -eq 0 ] && usage 13 [ $# -eq 0 ] && usage
14 14
15 while [ $# -gt 0 ] 15 while [ $# -gt 0 ]
16 do 16 do
17 case "$1" in 17 case "$1" in
18 --toolpath) repositorypath=$2;shift;; 18 --toolpath) repositorypath=$2;shift;;
19 --galaxypath) galaxypath=$2;shift;; 19 --galaxypath) galaxypath=$2;shift;;
20 --minwidth) minwidth=$2;shift;; 20 --minwidth) minwidth=$2;shift;;
21 --tab) tabs+=",$2";shift;; 21 --tab) tabs+=",$2";shift;;
22 --item) items+=",$2";shift;; 22 --item) items+=",$2";shift;;
23 --htmlout) htmlout=$2;shift;; 23 --htmlout) htmlout=$2;shift;;
24 --label) title="$@";shift;; 24 --label) title="$@";shift;;