Mercurial > repos > scottx611x > data_manager_fetch_gene_annotation

comparison data_manager_gene_annotation/data_manager/data_manager.py @ 43:e42284a13168 draft

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planemo upload
author scottx611x
date Fri, 08 Jul 2016 14:45:18 -0400
parents bf05cda04e1f
children f8cfca91827a
comparison
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42:bf05cda04e1f 43:e42284a13168
63 'data_tables': { 63 'data_tables': {
64 'gene_annotation': { 64 'gene_annotation': {
65 'value': gene_annotation_file_name.split(".")[0], 65 'value': gene_annotation_file_name.split(".")[0],
66 'dbkey': gene_annotation_file_name.split(".")[0], 66 'dbkey': gene_annotation_file_name.split(".")[0],
67 'name': name, 67 'name': name,
68 'path': os.path.join(work_dir, gene_annotation_file_name) 68 'path': gene_annotation_file_name
69 } 69 }
70 } 70 }
71 } 71 }
72 72
73 with open(os.path.join(args.output), "w+") as f: 73 with open(os.path.join(args.output), "w+") as f: