--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml	Fri Jul 08 11:32:41 2016 -0400
@@ -0,0 +1,35 @@
+<?xml version="1.0"?>
+<tool id="gene_annotation_fetcher_data_manager" name="Gene Annotation Fetch" tool_type="manage_data" version="1.0.0">
+    <description>gene annotation fetcher</description>
+    <stdio>
+        <exit_code description="Error" level="fatal" range="1:" />
+    </stdio>
+    <command interpreter="python">
+    <![CDATA[
+        data_manager.py --out "${out_file}"
+        #if $gene_annotation_url:
+            --url "${gene_annotation_url}"
+        #end if
+        #if $database_name:
+            --name "${database_name}"
+        #end if
+    ]]>
+    </command>
+    <inputs>
+        <param
+                help="Enter a unique identifier for the Data Table column to be created, or leave blank for an auto-generated uuid" label="Identifier for this DataTable entry" name="database_name" type="text" optional="True" />
+        <param
+                label="Enter URL pointing to a remote .gtf file" name="gene_annotation_url" type="text" optional="False"/>
+    </inputs>
+    <outputs>
+        <data format="data_manager_json" name="out_file" />
+    </outputs>
+    <tests>
+        <test>
+            <param name="database_name" value="cool_name"/>
+            <param name="gene_annotation_url" value="http://www.scott-ouellette.com/gene_annotations/chr1-hg19_genes.gtf"/>
+            <output name="out_file" file="gene_annotation_out.json" compare="contains"/>
+            <!--<extra_files type="file" name="chr1-hg19_genes.gtf" value="chr1-hg19_genes.gtf"/>-->
+        </test>
+    </tests>
+</tool>