Mercurial > repos > scottx611x > data_manager_fetch_gene_annotation

changeset 14:4fb8bd379972 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author scottx611x
date Wed, 22 Jun 2016 16:25:21 -0400
parents 865d5b55cce1
children 6261b513ae1b
files data_manager_gene_annotation/data_manager_conf.xml
diffstat 1 files changed, 4 insertions(+), 4 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager_gene_annotation/data_manager_conf.xml	Wed Jun 22 16:18:10 2016 -0400
+++ b/data_manager_gene_annotation/data_manager_conf.xml	Wed Jun 22 16:25:21 2016 -0400
@@ -8,11 +8,11 @@
 				<column name="dbkey" />
 				<column name="name" />
 				<column name="path" output_ref="out_file">
-					<move type="directory" relativize_symlinks="True">
-							<!-- <source>${path}</source>--> <!-- out_file.extra_files_path is used as base by default --> <!-- if no source, eg for type=directory, then refers to base -->
-							<target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${dbkey}/gene_annotations/${name}</target>
+					<move type="file" relativize_symlinks="True">
+							<source>${path}</source>
+							<target base="${GALAXY_DATA_MANAGER_DATA_PATH}">${name}/gene_annotations/${path}</target>
 					</move>
-					<value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/gene_annotations/${name}/${path}</value_translation>
+					<value_translation>${GALAXY_DATA_MANAGER_DATA_PATH}/${name}/gene_annotations/${path}</value_translation>
 					<value_translation type="function">abspath</value_translation>
 				</column>
 			</output>