Mercurial > repos > scottx611x > data_manager_fetch_gene_annotation
changeset 6:810ef478fc98 draft
Uploaded
author | scottx611x |
---|---|
date | Thu, 28 Apr 2016 16:16:31 -0400 |
parents | 189164b8f9d2 |
children | 89ba3a52e764 |
files | data_manager_gene_annotation/data_manager/data_manager.py |
diffstat | 1 files changed, 3 insertions(+), 3 deletions(-) [+] |
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--- a/data_manager_gene_annotation/data_manager/data_manager.py Tue Apr 26 14:34:42 2016 -0400 +++ b/data_manager_gene_annotation/data_manager/data_manager.py Thu Apr 28 16:16:31 2016 -0400 @@ -11,7 +11,7 @@ parser = argparse.ArgumentParser(description='Create data manager json.') parser.add_argument('--out', dest='output', action='store', help='JSON filename') parser.add_argument('--name', dest='name', action='store', default=str(datetime.date.today()), help='Data table entry unique ID') -parser.add_argument('--url', dest='url', action='store', help='Download URL', default="http://www.scott-ouellette.com/gene_annotations/chr1-hg19_genes.gtf") +parser.add_argument('--url', dest='url', action='store', help='Download URL') args = parser.parse_args() @@ -40,7 +40,7 @@ else: break except Exception as e: - print e, "FUCK" + print e finally: if src: src.close() @@ -73,4 +73,4 @@ file(args.output, 'w').write(json.dumps(data_manager_json)) if __name__ == '__main__': - main(args) + main(args) \ No newline at end of file