Mercurial > repos > scottx611x > data_manager_fetch_gene_annotation

changeset 38:d27c122c2424 draft

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planemo upload
author scottx611x
date Fri, 24 Jun 2016 09:25:53 -0400
parents 7af38f95bc8d
children 2ab076cf69df
files data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml
diffstat 1 files changed, 2 insertions(+), 1 deletions(-) [+]
line wrap: on
line diff
--- a/data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml	Thu Jun 23 17:56:47 2016 -0400
+++ b/data_manager_gene_annotation/data_manager/gene_annotation_fetcher.xml	Fri Jun 24 09:25:53 2016 -0400
@@ -26,7 +26,8 @@
         <test>
             <param name="database_name" value="cool_name"/>
             <param name="gene_annotation_url" value="http://www.scott-ouellette.com/gene_annotations/chr1-hg19_genes.gtf"/>
-            <output name="out_file" file="chr1-hg19_genes.gtf.data_manager_json"/>
+            <output name="out_file" file="../test-data/gene_annotation_out.json" compare="contains"/>
+            <extra_files type="file" name="chr1-hg19_genes.gtf" value="chr1-hg19_genes.gtf"/>
         </test>
     </tests>
 </tool>