Mercurial > repos > shellac > guppy_basecaller

annotate env/lib/python3.7/site-packages/planemo/reports/custom.js @ 0:26e78fe6e8c4 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
author shellac
date Sat, 02 May 2020 07:14:21 -0400
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1
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2 var renderTestResults = function(testData) {
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3 var summary = testData["summary"];
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4 var numTests = summary["num_tests"];
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5 var numProblems = summary["num_errors"] + summary["num_failures"] + summary["num_skips"];
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6 var $overview = $("#overview-content");
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7 var $progress = $(".progress");
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8 if(numTests == 0) {
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9 $overview.addClass("alert").addClass("alert-danger").text("No tests were executed.");
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10 $progress.append($('<div class="progress-bar progress-bar-warning" role="progressbar" style="width: 100%" />'));
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11 } else if(numProblems > 0) {
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12 $overview.addClass("alert").addClass("alert-danger").text("There were problems with " + numProblems + " test(s) out of " + numTests + ".");
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13 var problemPercent = (numProblems/(1.0 * numTests)) * 100.0;
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14 var successPercent = 100.0 - problemPercent;
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15 $progress.append($('<div class="progress-bar progress-bar-success" role="progressbar" style="width: ' + successPercent + '%" />'));
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16 $progress.append($('<div class="progress-bar progress-bar-danger" role="progressbar" style="width: ' + problemPercent + '%" />'));
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17 } else {
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18 $overview.addClass("alert").addClass("alert-success").text("All " + numTests + " test(s) successfully executed.");
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19 $progress.append($('<div class="progress-bar progress-bar-success" role="progressbar" style="width: 100%" />'));
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20 }
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21
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22 var $sidebar = $("#nav-sidebar-tests");
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23 for(var index in testData["tests"]) {
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24 var test = testData["tests"][index];
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25 var testResult = new TestResult(index, test);
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26 var rawId = testResult.rawId;
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27
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28 var panelType = testResult.passed ? "panel-success panel-success-custom" : "panel-danger panel-danger-custom";
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29 var $panel = $('<div class="panel">');
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30 $panel.addClass(panelType);
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31
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32 var $panelHeading = $('<div class="panel-heading">');
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33 var $panelTitle = $('<div class="panel-title">');
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34 var $a = $('<a class="collapsed" data-toggle="collapse">');
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35 $a.attr("id", rawId);
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36 $a.attr("data-target", "#collapse" + index);
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37 var testName = testResult.toolName + " (Test #" + (testResult.testIndex + 1) + (testResult.passed ? "" : ", Failed") + ")";
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38 $a.text(testName);
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39 var $navLink = $('<a>').attr('href', '#' + rawId).text(testName)
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40 if(!testResult.passed) {
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41 $navLink.addClass("text-danger text-danger-custom");
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42 } else {
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43 $navLink.addClass("text-success text-success-custom");
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44 }
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45 $sidebar.append($('<li>').append( $navLink ) );
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46 $panelTitle.append($a)
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47 $panelHeading.append($panelTitle);
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48
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49 var $panelBody = $('<div class="panel-body panel-collapse collapse" >');
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50 $panelBody.attr("id", "collapse" + index);
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51
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52 var $status = $('<div>').text("status: " + testResult.status);
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53 $panelBody.append($status);
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54 if(testResult.problems.length > 0) {
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55 var $problemsLabel = $('<div>').text("problems: ");
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56 var $problemsDiv = $('<div style="margin-left:10px;">');
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57 var $problemsUl = $('<ul>');
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58 for(var problemIndex in testResult.problems) {
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59 $problemsUl.append($('<li>').append($('<pre>').text(testResult.problems[problemIndex])));
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60 }
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61 $problemsDiv.append($problemsUl);
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62 $panelBody.append($problemsLabel).append($problemsDiv);
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63 }
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64 var $commandLabel = $('<div>command:</div>');
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65 var $stdoutLabel = $('<div>job standard output:</div>');
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66 var $stderrLabel = $('<div>job standard error:</div>');
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67 var $command;
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68 if(testResult.command !== null) {
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69 $command = $('<pre class="pre-scrollable" style="margin-left:10px;">').text(testResult.command);
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70 } else {
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71 $command = $('<div class="alert alert-warning" style="margin-left:10px;">').text("No command recorded.");
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72 }
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73 var $stdout;
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74 if(testResult.stdout !== null) {
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75 $stdout = $('<pre class="pre-scrollable" style="margin-left:10px;">').text(testResult.stdout);
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76 } else {
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77 $stdout = $('<div class="alert alert-warning" style="margin-left:10px;">').text("No standard output recorded.");
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78 }
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79 var $stderr;
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80 if(testResult.stderr !== null) {
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81 $stderr = $('<pre class="pre-scrollable" style="margin-left:10px;">').text(testResult.stderr);
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82 } else {
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83 $stderr = $('<div class="alert alert-warning" style="margin-left:10px;">').text("No standard error recorded.");
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84 }
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85 $panelBody
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86 .append($commandLabel)
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87 .append($command)
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88 .append($stdoutLabel)
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89 .append($stdout)
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90 .append($stderrLabel)
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91 .append($stderr);
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92 if(!testResult.passed) {
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93 var $logLabel = $('<div>log:</div>');
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94 var $log = $('<pre class="pre-scrollable" style="margin-left: 10px;">').text(testResult.problemLog);
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95 $panelBody.append($logLabel).append($log);
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96 }
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97
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98 $panel.append($panelHeading).append($panelBody);
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99 $(".main").append($panel);
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100 }
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101 }
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102
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103 var TestResult = function(index, data) {
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104 this.rawId = data["id"];
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105
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106 var idParts = this.rawId.split("TestForTool_");
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107 var testMethod = idParts[idParts.length-1];
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108 var splitParts;
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109 if(testMethod.indexOf(".test_tool_") > -1) {
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110 splitParts = testMethod.split(".test_tool_");
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111 } else {
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112 splitParts = rSplit(testMethod, "-", 1);
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113 }
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114 var toolName = splitParts[0];
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115 var testIndex;
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116 if(data["data"]["test_index"] !== null) {
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117 testIndex = data["data"]["test_index"];
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118 } else {
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119 testIndex = splitParts[1];
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120 }
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121 this.toolName = toolName;
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122 this.testIndex = parseInt(testIndex === undefined ? index : testIndex);
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123 this.status = data["data"]["status"];
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124 var job = data["data"]["job"];
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125 if(job) {
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126 this.stdout = data["data"]["job"]["stdout"];
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127 this.stderr = data["data"]["job"]["stderr"];
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128 this.command = data["data"]["job"]["command_line"];
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129 } else {
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130 this.stdout = null;
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131 this.stderr = null;
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132 this.command = null;
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133 }
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134 this.problems = [];
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135 var outputProblems = data["data"]["output_problems"] || [];
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136 var executionProblem = data["data"]["execution_problem"];
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137 this.problems.push.apply(this.problems, outputProblems);
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138 if(executionProblem) {
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139 this.problems.push(executionProblem);
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140 }
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141 this.problemLog = data["data"]["problem_log"];
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142 this.passed = (this.status == "success");
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143 }
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144
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145 // http://stackoverflow.com/questions/5202085/javascript-equivalent-of-pythons-rsplit
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146 function rSplit(str, sep, maxsplit) {
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147 var split = str.split(sep);
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148 return maxsplit ? [ split.slice(0, -maxsplit).join(sep) ].concat(split.slice(-maxsplit)) : split;
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149 }
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150
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151
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152 // http://stackoverflow.com/questions/19491336/get-url-parameter-jquery
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153 function getUrlParameter(sParam)
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154 {
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155 var sPageURL = window.location.search.substring(1);
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156 var sURLVariables = sPageURL.split('&');
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157 for (var i = 0; i < sURLVariables.length; i++)
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158 {
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159 var sParameterName = sURLVariables[i].split('=');
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160 if (sParameterName[0] == sParam)
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161 {
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162 return sParameterName[1];
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163 }
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164 }
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165 }