Mercurial > repos > shellac > guppy_basecaller
annotate env/lib/python3.7/site-packages/schema_salad/makedoc.py @ 2:6af9afd405e9 draft
"planemo upload commit 0a63dd5f4d38a1f6944587f52a8cd79874177fc1"
author | shellac |
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date | Thu, 14 May 2020 14:56:58 -0400 |
parents | 26e78fe6e8c4 |
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rev | line source |
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0
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1 from __future__ import absolute_import |
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2 |
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3 import argparse |
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4 import codecs |
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5 import copy |
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6 import logging |
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7 import os |
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8 import re |
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9 import sys |
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10 from codecs import StreamWriter # pylint: disable=unused-import |
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11 from io import TextIOWrapper, open |
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12 from typing import ( |
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13 IO, |
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14 Any, |
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15 Dict, |
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16 List, |
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17 MutableMapping, |
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18 MutableSequence, |
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19 Optional, |
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20 Set, |
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21 Tuple, |
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22 Union, |
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23 cast, |
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24 ) |
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25 |
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26 import mistune |
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27 import six |
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28 from six import StringIO |
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29 from six.moves import range, urllib |
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30 from typing_extensions import Text # pylint: disable=unused-import |
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31 |
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32 from . import schema |
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33 from .exceptions import SchemaSaladException, ValidationException |
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34 from .utils import add_dictlist, aslist |
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35 |
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36 # move to a regular typing import when Python 3.3-3.6 is no longer supported |
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37 |
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38 |
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39 _logger = logging.getLogger("salad") |
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40 |
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41 |
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42 def has_types(items): # type: (Any) -> List[Text] |
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43 r = [] # type: List[Text] |
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44 if isinstance(items, MutableMapping): |
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45 if items["type"] == "https://w3id.org/cwl/salad#record": |
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46 return [items["name"]] |
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47 for n in ("type", "items", "values"): |
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48 if n in items: |
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49 r.extend(has_types(items[n])) |
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50 return r |
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51 if isinstance(items, MutableSequence): |
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52 for i in items: |
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53 r.extend(has_types(i)) |
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54 return r |
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55 if isinstance(items, six.string_types): |
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56 return [items] |
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57 return [] |
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58 |
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59 |
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60 def linkto(item): # type: (Text) -> Text |
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61 _, frg = urllib.parse.urldefrag(item) |
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62 return "[{}](#{})".format(frg, to_id(frg)) |
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63 |
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64 |
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65 class MyRenderer(mistune.Renderer): |
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66 def __init__(self): # type: () -> None |
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67 super(MyRenderer, self).__init__() |
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68 self.options = {} |
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69 |
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70 def header(self, text, level, raw=None): # type: (Text, int, Any) -> Text |
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71 return """<h{} id="{}" class="section">{} <a href="#{}">§</a></h{}>""".format( |
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72 level, to_id(text), text, to_id(text), level |
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73 ) |
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74 |
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75 def table(self, header, body): # type: (Text, Text) -> Text |
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76 return ( |
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77 '<table class="table table-striped">\n<thead>{}</thead>\n' |
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78 "<tbody>\n{}</tbody>\n</table>\n" |
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79 ).format(header, body) |
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80 |
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81 |
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82 def to_id(text): # type: (Text) -> Text |
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83 textid = text |
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84 if text[0] in ("0", "1", "2", "3", "4", "5", "6", "7", "8", "9"): |
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85 try: |
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86 textid = text[text.index(" ") + 1 :] |
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87 except ValueError: |
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88 pass |
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89 textid = textid.replace(" ", "_") |
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90 return textid |
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91 |
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92 |
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93 class ToC(object): |
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94 def __init__(self): # type: () -> None |
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95 self.first_toc_entry = True |
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96 self.numbering = [0] |
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97 self.toc = "" |
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98 self.start_numbering = True |
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99 |
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100 def add_entry(self, thisdepth, title): # type: (int, str) -> str |
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101 depth = len(self.numbering) |
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102 if thisdepth < depth: |
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103 self.toc += "</ol>" |
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104 for _ in range(0, depth - thisdepth): |
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105 self.numbering.pop() |
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106 self.toc += "</li></ol>" |
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107 self.numbering[-1] += 1 |
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108 elif thisdepth == depth: |
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109 if not self.first_toc_entry: |
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110 self.toc += "</ol>" |
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111 else: |
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112 self.first_toc_entry = False |
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113 self.numbering[-1] += 1 |
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114 elif thisdepth > depth: |
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115 self.numbering.append(1) |
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116 |
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117 if self.start_numbering: |
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118 num = "{}.{}".format( |
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119 self.numbering[0], ".".join([str(n) for n in self.numbering[1:]]) |
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120 ) |
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121 else: |
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122 num = "" |
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123 self.toc += """<li><a href="#{}">{} {}</a><ol>\n""".format( |
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124 to_id(title), num, title |
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125 ) |
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126 return num |
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127 |
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128 def contents(self, idn): # type: (str) -> str |
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129 toc = """<h1 id="{}">Table of contents</h1> |
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130 <nav class="tocnav"><ol>{}""".format( |
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131 idn, self.toc |
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132 ) |
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133 toc += "</ol>" |
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134 for _ in range(0, len(self.numbering)): |
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135 toc += "</li></ol>" |
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136 toc += """</nav>""" |
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137 return toc |
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138 |
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139 |
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140 basicTypes = ( |
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141 "https://w3id.org/cwl/salad#null", |
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142 "http://www.w3.org/2001/XMLSchema#boolean", |
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143 "http://www.w3.org/2001/XMLSchema#int", |
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144 "http://www.w3.org/2001/XMLSchema#long", |
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145 "http://www.w3.org/2001/XMLSchema#float", |
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146 "http://www.w3.org/2001/XMLSchema#double", |
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147 "http://www.w3.org/2001/XMLSchema#string", |
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148 "https://w3id.org/cwl/salad#record", |
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149 "https://w3id.org/cwl/salad#enum", |
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150 "https://w3id.org/cwl/salad#array", |
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151 ) |
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152 |
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153 |
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154 def number_headings(toc, maindoc): # type: (ToC, str) -> str |
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155 mdlines = [] |
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156 skip = False |
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157 for line in maindoc.splitlines(): |
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158 if line.strip() == "# Introduction": |
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159 toc.start_numbering = True |
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160 toc.numbering = [0] |
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161 |
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162 if "```" in line: |
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163 skip = not skip |
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164 |
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165 if not skip: |
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166 m = re.match(r"^(#+) (.*)", line) |
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167 if m is not None: |
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168 num = toc.add_entry(len(m.group(1)), m.group(2)) |
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169 line = "{} {} {}".format(m.group(1), num, m.group(2)) |
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170 line = re.sub(r"^(https?://\S+)", r"[\1](\1)", line) |
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171 mdlines.append(line) |
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172 |
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173 maindoc = "\n".join(mdlines) |
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174 return maindoc |
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175 |
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176 |
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177 def fix_doc(doc): # type: (Union[List[str], str]) -> str |
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178 if isinstance(doc, MutableSequence): |
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179 docstr = "".join(doc) |
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180 else: |
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181 docstr = doc |
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182 return "\n".join( |
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183 [ |
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184 re.sub(r"<([^>@]+@[^>]+)>", r"[\1](mailto:\1)", d) |
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185 for d in docstr.splitlines() |
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186 ] |
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187 ) |
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188 |
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189 |
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190 class RenderType(object): |
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191 def __init__(self, toc, j, renderlist, redirects, primitiveType): |
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192 # type: (ToC, List[Dict[Text, Text]], str, Dict[Text, Text], str) -> None |
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193 self.typedoc = StringIO() |
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194 self.toc = toc |
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195 self.subs = {} # type: Dict[str, str] |
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196 self.docParent = {} # type: Dict[str, List[Text]] |
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197 self.docAfter = {} # type: Dict[str, List[Text]] |
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198 self.rendered = set() # type: Set[str] |
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199 self.redirects = redirects |
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200 self.title = None # type: Optional[str] |
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201 self.primitiveType = primitiveType |
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202 |
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203 for t in j: |
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204 if "extends" in t: |
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205 for e in aslist(t["extends"]): |
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206 add_dictlist(self.subs, e, t["name"]) |
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207 # if "docParent" not in t and "docAfter" not in t: |
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208 # add_dictlist(self.docParent, e, t["name"]) |
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209 |
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210 if t.get("docParent"): |
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211 add_dictlist(self.docParent, t["docParent"], t["name"]) |
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212 |
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213 if t.get("docChild"): |
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214 for c in aslist(t["docChild"]): |
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215 add_dictlist(self.docParent, t["name"], c) |
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216 |
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217 if t.get("docAfter"): |
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218 add_dictlist(self.docAfter, t["docAfter"], t["name"]) |
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219 |
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220 metaschema_loader = schema.get_metaschema()[2] |
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221 alltypes = schema.extend_and_specialize(j, metaschema_loader) |
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222 |
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223 self.typemap = {} # type: Dict[Text, Dict[Text, Text]] |
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224 self.uses = {} # type: Dict[Text, List[Tuple[Text, Text]]] |
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225 self.record_refs = {} # type: Dict[Text, List[Text]] |
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226 for entry in alltypes: |
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227 self.typemap[entry["name"]] = entry |
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228 try: |
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229 if entry["type"] == "record": |
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230 self.record_refs[entry["name"]] = [] |
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231 fields = entry.get( |
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232 "fields", [] |
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233 ) # type: Union[Text, List[Dict[Text, Text]]] |
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234 if isinstance(fields, Text): |
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235 raise KeyError("record fields must be a list of mappings") |
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236 for f in fields: # type: Dict[Text, Text] |
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237 p = has_types(f) |
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238 for tp in p: |
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239 if tp not in self.uses: |
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240 self.uses[tp] = [] |
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241 if (entry["name"], f["name"]) not in self.uses[tp]: |
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242 _, frg1 = urllib.parse.urldefrag(t["name"]) |
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243 _, frg2 = urllib.parse.urldefrag(f["name"]) |
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244 self.uses[tp].append((frg1, frg2)) |
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245 if ( |
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246 tp not in basicTypes |
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247 and tp not in self.record_refs[entry["name"]] |
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248 ): |
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249 self.record_refs[entry["name"]].append(tp) |
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250 except KeyError: |
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251 _logger.error("Did not find 'type' in %s", t) |
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252 _logger.error("record refs is %s", self.record_refs) |
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253 raise |
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254 |
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255 for entry in alltypes: |
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256 if entry["name"] in renderlist or ( |
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257 (not renderlist) |
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258 and ("extends" not in entry) |
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259 and ("docParent" not in entry) |
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260 and ("docAfter" not in entry) |
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261 ): |
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262 self.render_type(entry, 1) |
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263 |
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264 def typefmt( |
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265 self, |
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266 tp, # type: Any |
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267 redirects, # type: Dict[Text, Text] |
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268 nbsp=False, # type: bool |
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269 jsonldPredicate=None, # type: Optional[Dict[str, str]] |
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270 ): |
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271 # type: (...) -> Text |
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272 if isinstance(tp, MutableSequence): |
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273 if nbsp and len(tp) <= 3: |
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274 return " | ".join( |
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275 [ |
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276 self.typefmt(n, redirects, jsonldPredicate=jsonldPredicate) |
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277 for n in tp |
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278 ] |
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279 ) |
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280 return " | ".join( |
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281 [ |
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282 self.typefmt(n, redirects, jsonldPredicate=jsonldPredicate) |
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283 for n in tp |
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284 ] |
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285 ) |
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286 if isinstance(tp, MutableMapping): |
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287 if tp["type"] == "https://w3id.org/cwl/salad#array": |
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288 ar = "array<{}>".format( |
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289 self.typefmt(tp["items"], redirects, nbsp=True) |
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290 ) |
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291 if jsonldPredicate is not None and "mapSubject" in jsonldPredicate: |
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292 if "mapPredicate" in jsonldPredicate: |
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293 ar += " | " |
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294 if len(ar) > 40: |
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295 ar += "<br>" |
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296 |
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297 ar += ( |
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298 "<a href='#map'>map</a><<code>{}</code>" |
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299 ", <code>{}</code> | {}>".format( |
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300 jsonldPredicate["mapSubject"], |
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301 jsonldPredicate["mapPredicate"], |
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302 self.typefmt(tp["items"], redirects), |
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303 ) |
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304 ) |
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305 else: |
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306 ar += " | " |
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307 if len(ar) > 40: |
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308 ar += "<br>" |
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309 ar += "<a href='#map'>map</a><<code>{}</code>, {}>".format( |
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310 jsonldPredicate["mapSubject"], |
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311 self.typefmt(tp["items"], redirects), |
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312 ) |
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313 return ar |
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314 if tp["type"] in ( |
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315 "https://w3id.org/cwl/salad#record", |
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316 "https://w3id.org/cwl/salad#enum", |
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317 ): |
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318 frg = schema.avro_name(tp["name"]) |
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319 if tp["name"] in redirects: |
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320 return """<a href="{}">{}</a>""".format(redirects[tp["name"]], frg) |
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321 if tp["name"] in self.typemap: |
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322 return """<a href="#{}">{}</a>""".format(to_id(frg), frg) |
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323 if ( |
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324 tp["type"] == "https://w3id.org/cwl/salad#enum" |
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325 and len(tp["symbols"]) == 1 |
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326 ): |
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327 return "constant value <code>{}</code>".format( |
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328 schema.avro_name(tp["symbols"][0]) |
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329 ) |
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330 return frg |
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331 if isinstance(tp["type"], MutableMapping): |
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332 return self.typefmt(tp["type"], redirects) |
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333 else: |
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334 if str(tp) in redirects: |
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335 return """<a href="{}">{}</a>""".format(redirects[tp], redirects[tp]) |
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336 if str(tp) in basicTypes: |
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337 return """<a href="{}">{}</a>""".format( |
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338 self.primitiveType, schema.avro_name(str(tp)) |
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339 ) |
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340 _, frg = urllib.parse.urldefrag(tp) |
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341 if frg != "": |
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342 tp = frg |
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343 return """<a href="#{}">{}</a>""".format(to_id(tp), tp) |
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344 raise SchemaSaladException("We should not be here!") |
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345 |
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346 def render_type(self, f, depth): # type: (Dict[Text, Any], int) -> None |
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347 if f["name"] in self.rendered or f["name"] in self.redirects: |
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348 return |
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349 self.rendered.add(f["name"]) |
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350 |
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351 if f.get("abstract"): |
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352 return |
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353 |
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354 if "doc" not in f: |
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355 f["doc"] = "" |
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356 |
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357 f["type"] = copy.deepcopy(f) |
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358 f["doc"] = "" |
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359 f = f["type"] |
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360 |
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361 if "doc" not in f: |
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362 f["doc"] = "" |
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363 |
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364 def extendsfrom(item, ex): |
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365 # type: (Dict[Text, Any], List[Dict[Text, Any]]) -> None |
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366 if "extends" in item: |
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367 for e in aslist(item["extends"]): |
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368 ex.insert(0, self.typemap[e]) |
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369 extendsfrom(self.typemap[e], ex) |
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370 |
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371 ex = [f] |
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372 extendsfrom(f, ex) |
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373 |
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374 enumDesc = {} |
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375 if f["type"] == "enum" and isinstance(f["doc"], MutableSequence): |
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376 for e in ex: |
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377 for i in e["doc"]: |
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378 idx = i.find(":") |
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379 if idx > -1: |
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380 enumDesc[i[:idx]] = i[idx + 1 :] |
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381 e["doc"] = [ |
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382 i |
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383 for i in e["doc"] |
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384 if i.find(":") == -1 or i.find(" ") < i.find(":") |
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385 ] |
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386 |
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387 f["doc"] = fix_doc(f["doc"]) |
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388 |
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389 if f["type"] == "record": |
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390 for field in f.get("fields", []): |
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391 if "doc" not in field: |
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392 field["doc"] = "" |
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393 |
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394 if f["type"] != "documentation": |
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395 lines = [] |
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396 for line in f["doc"].splitlines(): |
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397 if len(line) > 0 and line[0] == "#": |
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398 line = ("#" * depth) + line |
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399 lines.append(line) |
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400 f["doc"] = "\n".join(lines) |
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401 |
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402 _, frg = urllib.parse.urldefrag(f["name"]) |
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403 num = self.toc.add_entry(depth, frg) |
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404 doc = u"{} {} {}\n".format(("#" * depth), num, frg) |
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405 else: |
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406 doc = u"" |
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407 |
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408 if self.title is None and f["doc"]: |
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409 title = f["doc"][0 : f["doc"].index("\n")] |
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410 if title.startswith("# "): |
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411 self.title = title[2:] |
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412 else: |
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413 self.title = title |
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414 |
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415 if f["type"] == "documentation": |
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416 f["doc"] = number_headings(self.toc, f["doc"]) |
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417 |
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418 doc = doc + "\n\n" + f["doc"] |
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419 |
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420 doc = mistune.markdown(doc, renderer=MyRenderer()) |
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421 |
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422 if f["type"] == "record": |
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423 doc += "<h3>Fields</h3>" |
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424 doc += """ |
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425 <div class="responsive-table"> |
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426 <div class="row responsive-table-header"> |
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427 <div class="col-xs-3 col-lg-2">field</div> |
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428 <div class="col-xs-2 col-lg-1">required</div> |
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429 <div class="col-xs-7 col-lg-3">type</div> |
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430 <div class="col-xs-12 col-lg-6 description-header">description</div> |
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431 </div>""" |
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432 required = [] |
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433 optional = [] |
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434 for i in f.get("fields", []): |
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435 tp = i["type"] |
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436 if ( |
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437 isinstance(tp, MutableSequence) |
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438 and tp[0] == "https://w3id.org/cwl/salad#null" |
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439 ): |
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440 opt = False |
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441 tp = tp[1:] |
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442 else: |
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443 opt = True |
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444 |
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445 desc = i["doc"] |
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446 |
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447 rfrg = schema.avro_name(i["name"]) |
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448 tr = """ |
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449 <div class="row responsive-table-row"> |
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450 <div class="col-xs-3 col-lg-2"><code>{}</code></div> |
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451 <div class="col-xs-2 col-lg-1">{}</div> |
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452 <div class="col-xs-7 col-lg-3">{}</div> |
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453 <div class="col-xs-12 col-lg-6 description-col">{}</div> |
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454 </div>""".format( |
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455 rfrg, |
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456 "required" if opt else "optional", |
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457 self.typefmt( |
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458 tp, self.redirects, jsonldPredicate=i.get("jsonldPredicate") |
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459 ), |
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460 mistune.markdown(desc), |
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461 ) |
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462 if opt: |
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463 required.append(tr) |
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464 else: |
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465 optional.append(tr) |
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466 for i in required + optional: |
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467 doc += i |
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468 doc += """</div>""" |
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469 elif f["type"] == "enum": |
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470 doc += "<h3>Symbols</h3>" |
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471 doc += """<table class="table table-striped">""" |
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472 doc += "<tr><th>symbol</th><th>description</th></tr>" |
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473 for e in ex: |
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474 for i in e.get("symbols", []): |
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475 doc += "<tr>" |
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476 efrg = schema.avro_name(i) |
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477 doc += "<td><code>{}</code></td><td>{}</td>".format( |
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478 efrg, enumDesc.get(efrg, "") |
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479 ) |
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480 doc += "</tr>" |
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481 doc += """</table>""" |
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482 f["doc"] = doc |
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483 |
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484 self.typedoc.write(f["doc"]) |
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485 |
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486 subs = self.docParent.get(f["name"], []) + self.record_refs.get(f["name"], []) |
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487 if len(subs) == 1: |
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488 self.render_type(self.typemap[subs[0]], depth) |
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489 else: |
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490 for s in subs: |
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491 self.render_type(self.typemap[s], depth + 1) |
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492 |
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493 for s in self.docAfter.get(f["name"], []): |
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494 self.render_type(self.typemap[s], depth) |
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495 |
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496 |
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497 def avrold_doc( |
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498 j, # type: List[Dict[Text, Any]] |
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499 outdoc, # type: Union[IO[Any], StreamWriter] |
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500 renderlist, # type: str |
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501 redirects, # type: Dict[Text, Text] |
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502 brand, # type: str |
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503 brandlink, # type: str |
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504 primtype, # type: str |
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505 brandstyle=None, # type: Optional[str] |
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506 brandinverse=False, # type: bool |
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507 ): # type: (...) -> None |
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508 toc = ToC() |
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509 toc.start_numbering = False |
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510 |
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511 rt = RenderType(toc, j, renderlist, redirects, primtype) |
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512 content = rt.typedoc.getvalue() # type: Text |
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513 |
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514 if brandstyle is None: |
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515 bootstrap_url = ( |
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516 "https://maxcdn.bootstrapcdn.com/bootstrap/3.3.4/css/bootstrap.min.css" |
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517 ) |
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518 bootstrap_integrity = ( |
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519 "sha384-604wwakM23pEysLJAhja8Lm42IIwYrJ0dEAqzFsj9pJ/P5buiujjywArgPCi8eoz" |
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520 ) |
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521 brandstyle_template = ( |
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522 '<link rel="stylesheet" href={} integrity={} crossorigin="anonymous">' |
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523 ) |
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524 brandstyle = brandstyle_template.format(bootstrap_url, bootstrap_integrity) |
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525 |
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526 picturefill_url = ( |
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527 "https://cdn.rawgit.com/scottjehl/picturefill/3.0.2/dist/picturefill.min.js" |
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528 ) |
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529 picturefill_integrity = ( |
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530 "sha384-ZJsVW8YHHxQHJ+SJDncpN90d0EfAhPP+yA94n+EhSRzhcxfo84yMnNk+v37RGlWR" |
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531 ) |
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532 outdoc.write( |
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533 """ |
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534 <!DOCTYPE html> |
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535 <html> |
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536 <head> |
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537 <meta charset="UTF-8"> |
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538 <meta name="viewport" content="width=device-width, initial-scale=1.0"> |
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539 {} |
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540 <script> |
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541 // Picture element HTML5 shiv |
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542 document.createElement( "picture" ); |
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543 </script> |
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544 <script src="{}" |
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545 integrity="{}" |
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546 crossorigin="anonymous" async></script> |
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547 """.format( |
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548 brandstyle, picturefill_url, picturefill_integrity |
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549 ) |
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550 ) |
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551 |
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552 outdoc.write("<title>{}</title>".format(rt.title)) |
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553 |
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554 outdoc.write( |
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555 """ |
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556 <style> |
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557 :target { |
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558 padding-top: 61px; |
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559 margin-top: -61px; |
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560 } |
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561 body { |
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562 padding-top: 61px; |
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563 } |
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564 .tocnav ol { |
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565 list-style: none |
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566 } |
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567 pre { |
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568 margin-left: 2em; |
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569 margin-right: 2em; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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570 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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|
571 .section a { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
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572 visibility: hidden; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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573 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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|
574 .section:hover a { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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575 visibility: visible; |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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576 color: rgb(201, 201, 201); |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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parents:
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577 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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|
578 .responsive-table-header { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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|
579 text-align: left; |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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580 padding: 8px; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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581 vertical-align: top; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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582 font-weight: bold; |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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583 border-top-color: rgb(221, 221, 221); |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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584 border-top-style: solid; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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585 border-top-width: 1px; |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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586 background-color: #f9f9f9 |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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587 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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588 .responsive-table > .responsive-table-row { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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589 text-align: left; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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590 padding: 8px; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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591 vertical-align: top; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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592 border-top-color: rgb(221, 221, 221); |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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593 border-top-style: solid; |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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594 border-top-width: 1px; |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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595 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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596 @media (min-width: 0px), print { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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597 .description-header { |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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598 display: none; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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599 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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600 .description-col { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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601 margin-top: 1em; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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602 margin-left: 1.5em; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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603 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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604 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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605 @media (min-width: 1170px) { |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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606 .description-header { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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607 display: inline; |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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608 } |
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"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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609 .description-col { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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610 margin-top: 0px; |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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611 margin-left: 0px; |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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612 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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|
613 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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614 .responsive-table-row:nth-of-type(odd) { |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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615 background-color: #f9f9f9 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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616 } |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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617 </style> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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618 </head> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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|
619 <body> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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620 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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|
621 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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622 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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changeset
|
623 navbar_extraclass = "" |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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|
624 if brandinverse: |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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625 navbar_extraclass = "navbar-inverse" |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
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|
626 outdoc.write( |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
627 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
628 <nav class="navbar navbar-default navbar-fixed-top {}"> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
629 <div class="container"> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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changeset
|
630 <div class="navbar-header"> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
631 <a class="navbar-brand" href="{}">{}</a> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
632 """.format( |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
633 navbar_extraclass, brandlink, brand |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
634 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
635 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
636 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
637 if u"<!--ToC-->" in content: |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
638 content = content.replace(u"<!--ToC-->", toc.contents("toc")) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
639 outdoc.write( |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
640 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
641 <ul class="nav navbar-nav"> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
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|
642 <li><a href="#toc">Table of contents</a></li> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
643 </ul> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
644 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
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|
645 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
646 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
647 outdoc.write( |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
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|
648 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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changeset
|
649 </div> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
650 </div> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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changeset
|
651 </nav> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
652 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
653 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
654 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
655 outdoc.write( |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
656 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
657 <div class="container"> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
658 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
659 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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parents:
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|
660 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
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parents:
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|
661 outdoc.write( |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
662 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
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|
663 <div class="row"> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
664 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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changeset
|
665 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
666 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
667 outdoc.write( |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
668 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
diff
changeset
|
669 <div class="col-md-12" role="main" id="main">""" |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
670 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
671 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
672 outdoc.write(content) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
673 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
674 outdoc.write("""</div>""") |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
675 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
676 outdoc.write( |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
677 """ |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
678 </div> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
679 </div> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
680 </body> |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
681 </html>""" |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
682 ) |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
683 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
684 |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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|
685 def main(): # type: () -> None |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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686 parser = argparse.ArgumentParser() |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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687 parser.add_argument("schema") |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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688 parser.add_argument("--only", action="append") |
26e78fe6e8c4
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
shellac
parents:
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689 parser.add_argument("--redirect", action="append") |
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690 parser.add_argument("--brand") |
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691 parser.add_argument("--brandlink") |
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692 parser.add_argument("--brandstyle") |
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693 parser.add_argument("--brandinverse", default=False, action="store_true") |
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694 parser.add_argument("--primtype", default="#PrimitiveType") |
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695 |
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696 args = parser.parse_args() |
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697 |
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698 makedoc(args) |
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699 |
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700 |
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701 def makedoc(args): # type: (argparse.Namespace) -> None |
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702 |
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703 s = [] # type: List[Dict[Text, Any]] |
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704 a = args.schema |
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705 with open(a, encoding="utf-8") as f: |
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706 if a.endswith("md"): |
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707 s.append( |
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708 { |
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709 "name": os.path.splitext(os.path.basename(a))[0], |
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710 "type": "documentation", |
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711 "doc": f.read(), |
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712 } |
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713 ) |
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714 else: |
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715 uri = "file://" + os.path.abspath(a) |
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716 metaschema_loader = schema.get_metaschema()[2] |
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717 j, _ = metaschema_loader.resolve_ref(uri, "") |
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718 if isinstance(j, MutableSequence): |
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719 s.extend(j) |
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720 elif isinstance(j, MutableMapping): |
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721 s.append(j) |
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722 else: |
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723 raise ValidationException("Schema must resolve to a list or a dict") |
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724 redirect = {} |
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725 for r in args.redirect or []: |
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726 redirect[r.split("=")[0]] = r.split("=")[1] |
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727 renderlist = args.only if args.only else [] |
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728 stdout = cast(TextIOWrapper, sys.stdout) # type: Union[TextIOWrapper, StreamWriter] |
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729 if sys.stdout.encoding != "UTF-8": |
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730 if sys.version_info >= (3,): |
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731 stdout = TextIOWrapper(sys.stdout.buffer, encoding="utf-8") |
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732 else: |
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733 stdout = codecs.getwriter("utf-8")(sys.stdout) |
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734 avrold_doc( |
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735 s, |
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736 stdout, |
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737 renderlist, |
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738 redirect, |
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739 args.brand, |
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740 args.brandlink, |
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741 args.primtype, |
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742 brandstyle=args.brandstyle, |
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743 brandinverse=args.brandinverse, |
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744 ) |
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745 |
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746 |
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747 if __name__ == "__main__": |
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748 main() |