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annotate env/lib/python3.7/site-packages/bioblend/_tests/TestGalaxyToolInputs.py @ 3:758bc20232e8 draft

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"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
author shellac
date Thu, 14 May 2020 16:20:52 -0400
parents 26e78fe6e8c4
children
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1 from bioblend.galaxy.tools.inputs import (
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2 conditional,
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3 dataset,
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4 inputs,
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5 repeat,
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6 )
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7
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8
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9 def test_conditional():
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10 # Build up example inputs for random_lines1
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11 as_dict = inputs().set(
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12 "num_lines", 5
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13 ).set(
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14 "input", dataset("encoded1")
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15 ).set(
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16 "seed_source", conditional().set(
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17 "seed_source_selector", "set_seed"
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18 ).set(
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19 "seed", "asdf"
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20 )
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21 ).to_dict()
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22 assert as_dict["num_lines"] == 5
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23 assert as_dict["input"]["src"] == "hda"
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24 assert as_dict["input"]["id"] == "encoded1"
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25 assert as_dict["seed_source|seed_source_selector"] == "set_seed"
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26 assert as_dict["seed_source|seed"] == "asdf"
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27
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28
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29 def test_repeat():
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30 # Build up inputs for cat1
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31 as_dict = inputs().set(
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32 "input1", dataset("encoded1")
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33 ).set(
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34 "queries", repeat().instance(
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35 inputs().set_dataset_param("input2", "encoded2")
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36 ).instance(
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37 inputs().set_dataset_param("input2", "encoded3")
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38 )
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39 ).to_dict()
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40 assert as_dict["input1"]["src"] == "hda"
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41 assert as_dict["input1"]["id"] == "encoded1"
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42 assert as_dict["queries_0|input2"]["src"] == "hda"
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43 assert as_dict["queries_0|input2"]["id"] == "encoded2"
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44 assert as_dict["queries_1|input2"]["src"] == "hda"
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45 assert as_dict["queries_1|input2"]["id"] == "encoded3"