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annotate env/lib/python3.7/site-packages/planemo/engine/cwltool.py @ 4:79f47841a781 draft

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"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
author shellac
date Thu, 14 May 2020 16:47:39 -0400
parents 26e78fe6e8c4
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1 """Module contianing the :class:`CwlToolEngine` implementation of :class:`Engine`."""
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3 from planemo import cwl
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4 from planemo.runnable import RunnableType
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5 from .interface import BaseEngine
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8 class CwlToolEngine(BaseEngine):
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9 """An :class:`Engine` implementation backed by cwltool.
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11 More information on cwltool can be found at https://github.com/common-workflow-language/cwltool.
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12 """
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14 handled_runnable_types = [RunnableType.cwl_tool, RunnableType.cwl_workflow]
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16 def _run(self, runnable, job_path):
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17 """Run CWL job using cwltool."""
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18 path = runnable.path
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19 return cwl.run_cwltool(self._ctx, path, job_path, **self._kwds)
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22 __all__ = (
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23 "CwlToolEngine",
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24 )