Mercurial > repos > shellac > guppy_basecaller
comparison env/lib/python3.7/site-packages/bioblend/_tests/TestGalaxyToolInputs.py @ 0:26e78fe6e8c4 draft
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
| author | shellac |
|---|---|
| date | Sat, 02 May 2020 07:14:21 -0400 |
| parents | |
| children |
comparison
equal
deleted
inserted
replaced
| -1:000000000000 | 0:26e78fe6e8c4 |
|---|---|
| 1 from bioblend.galaxy.tools.inputs import ( | |
| 2 conditional, | |
| 3 dataset, | |
| 4 inputs, | |
| 5 repeat, | |
| 6 ) | |
| 7 | |
| 8 | |
| 9 def test_conditional(): | |
| 10 # Build up example inputs for random_lines1 | |
| 11 as_dict = inputs().set( | |
| 12 "num_lines", 5 | |
| 13 ).set( | |
| 14 "input", dataset("encoded1") | |
| 15 ).set( | |
| 16 "seed_source", conditional().set( | |
| 17 "seed_source_selector", "set_seed" | |
| 18 ).set( | |
| 19 "seed", "asdf" | |
| 20 ) | |
| 21 ).to_dict() | |
| 22 assert as_dict["num_lines"] == 5 | |
| 23 assert as_dict["input"]["src"] == "hda" | |
| 24 assert as_dict["input"]["id"] == "encoded1" | |
| 25 assert as_dict["seed_source|seed_source_selector"] == "set_seed" | |
| 26 assert as_dict["seed_source|seed"] == "asdf" | |
| 27 | |
| 28 | |
| 29 def test_repeat(): | |
| 30 # Build up inputs for cat1 | |
| 31 as_dict = inputs().set( | |
| 32 "input1", dataset("encoded1") | |
| 33 ).set( | |
| 34 "queries", repeat().instance( | |
| 35 inputs().set_dataset_param("input2", "encoded2") | |
| 36 ).instance( | |
| 37 inputs().set_dataset_param("input2", "encoded3") | |
| 38 ) | |
| 39 ).to_dict() | |
| 40 assert as_dict["input1"]["src"] == "hda" | |
| 41 assert as_dict["input1"]["id"] == "encoded1" | |
| 42 assert as_dict["queries_0|input2"]["src"] == "hda" | |
| 43 assert as_dict["queries_0|input2"]["id"] == "encoded2" | |
| 44 assert as_dict["queries_1|input2"]["src"] == "hda" | |
| 45 assert as_dict["queries_1|input2"]["id"] == "encoded3" |