Mercurial > repos > shellac > guppy_basecaller
comparison env/lib/python3.7/site-packages/planemo/virtualenv.py @ 5:9b1c78e6ba9c draft default tip
"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"
author | shellac |
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date | Mon, 01 Jun 2020 08:59:25 -0400 |
parents | 79f47841a781 |
children |
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4:79f47841a781 | 5:9b1c78e6ba9c |
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1 """ Utilities for using virtualenv as library and planemo command. | |
2 """ | |
3 from __future__ import absolute_import | |
4 | |
5 import os | |
6 import sys | |
7 | |
8 import virtualenv | |
9 from galaxy.tool_util.deps.commands import which | |
10 | |
11 | |
12 DEFAULT_PYTHON_VERSION = os.environ.get("PLANEMO_DEFAULT_PYTHON_VERSION", "2.7") | |
13 | |
14 | |
15 def create_and_exit(virtualenv_path, **kwds): | |
16 sys.argv = ["virtualenv", virtualenv_path] | |
17 python = kwds.get("python", None) | |
18 if python: | |
19 sys.argv.extend(["--python", python]) | |
20 return virtualenv.main() | |
21 | |
22 | |
23 def create_command(virtualenv_path, galaxy_python_version=None): | |
24 """ If virtualenv is on Planemo's path use it, otherwise use the planemo | |
25 subcommand virtualenv to create the virtualenv. | |
26 """ | |
27 planemo_path = os.path.abspath(sys.argv[0]) | |
28 virtualenv_on_path = which("virtualenv") | |
29 if virtualenv_on_path: | |
30 base_command = [ | |
31 os.path.abspath(virtualenv_on_path), | |
32 ] | |
33 else: | |
34 base_command = [ | |
35 planemo_path, "virtualenv", | |
36 ] | |
37 | |
38 command = base_command | |
39 | |
40 # Create a virtualenv with the selected python version. | |
41 # default to 2.7 | |
42 if galaxy_python_version is None: | |
43 galaxy_python_version = DEFAULT_PYTHON_VERSION | |
44 python = which("python%s" % galaxy_python_version) | |
45 if python: | |
46 python = os.path.abspath(python) | |
47 command.extend(["-p", python]) | |
48 command.append(virtualenv_path) | |
49 return " ".join(command) |