Mercurial > repos > shellac > guppy_basecaller
diff env/lib/python3.7/site-packages/click/utils.py @ 0:26e78fe6e8c4 draft
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
author | shellac |
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date | Sat, 02 May 2020 07:14:21 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/env/lib/python3.7/site-packages/click/utils.py Sat May 02 07:14:21 2020 -0400 @@ -0,0 +1,455 @@ +import os +import sys + +from ._compat import _default_text_stderr +from ._compat import _default_text_stdout +from ._compat import auto_wrap_for_ansi +from ._compat import binary_streams +from ._compat import filename_to_ui +from ._compat import get_filesystem_encoding +from ._compat import get_streerror +from ._compat import is_bytes +from ._compat import open_stream +from ._compat import PY2 +from ._compat import should_strip_ansi +from ._compat import string_types +from ._compat import strip_ansi +from ._compat import text_streams +from ._compat import text_type +from ._compat import WIN +from .globals import resolve_color_default + +if not PY2: + from ._compat import _find_binary_writer +elif WIN: + from ._winconsole import _get_windows_argv + from ._winconsole import _hash_py_argv + from ._winconsole import _initial_argv_hash + +echo_native_types = string_types + (bytes, bytearray) + + +def _posixify(name): + return "-".join(name.split()).lower() + + +def safecall(func): + """Wraps a function so that it swallows exceptions.""" + + def wrapper(*args, **kwargs): + try: + return func(*args, **kwargs) + except Exception: + pass + + return wrapper + + +def make_str(value): + """Converts a value into a valid string.""" + if isinstance(value, bytes): + try: + return value.decode(get_filesystem_encoding()) + except UnicodeError: + return value.decode("utf-8", "replace") + return text_type(value) + + +def make_default_short_help(help, max_length=45): + """Return a condensed version of help string.""" + words = help.split() + total_length = 0 + result = [] + done = False + + for word in words: + if word[-1:] == ".": + done = True + new_length = 1 + len(word) if result else len(word) + if total_length + new_length > max_length: + result.append("...") + done = True + else: + if result: + result.append(" ") + result.append(word) + if done: + break + total_length += new_length + + return "".join(result) + + +class LazyFile(object): + """A lazy file works like a regular file but it does not fully open + the file but it does perform some basic checks early to see if the + filename parameter does make sense. This is useful for safely opening + files for writing. + """ + + def __init__( + self, filename, mode="r", encoding=None, errors="strict", atomic=False + ): + self.name = filename + self.mode = mode + self.encoding = encoding + self.errors = errors + self.atomic = atomic + + if filename == "-": + self._f, self.should_close = open_stream(filename, mode, encoding, errors) + else: + if "r" in mode: + # Open and close the file in case we're opening it for + # reading so that we can catch at least some errors in + # some cases early. + open(filename, mode).close() + self._f = None + self.should_close = True + + def __getattr__(self, name): + return getattr(self.open(), name) + + def __repr__(self): + if self._f is not None: + return repr(self._f) + return "<unopened file '{}' {}>".format(self.name, self.mode) + + def open(self): + """Opens the file if it's not yet open. This call might fail with + a :exc:`FileError`. Not handling this error will produce an error + that Click shows. + """ + if self._f is not None: + return self._f + try: + rv, self.should_close = open_stream( + self.name, self.mode, self.encoding, self.errors, atomic=self.atomic + ) + except (IOError, OSError) as e: # noqa: E402 + from .exceptions import FileError + + raise FileError(self.name, hint=get_streerror(e)) + self._f = rv + return rv + + def close(self): + """Closes the underlying file, no matter what.""" + if self._f is not None: + self._f.close() + + def close_intelligently(self): + """This function only closes the file if it was opened by the lazy + file wrapper. For instance this will never close stdin. + """ + if self.should_close: + self.close() + + def __enter__(self): + return self + + def __exit__(self, exc_type, exc_value, tb): + self.close_intelligently() + + def __iter__(self): + self.open() + return iter(self._f) + + +class KeepOpenFile(object): + def __init__(self, file): + self._file = file + + def __getattr__(self, name): + return getattr(self._file, name) + + def __enter__(self): + return self + + def __exit__(self, exc_type, exc_value, tb): + pass + + def __repr__(self): + return repr(self._file) + + def __iter__(self): + return iter(self._file) + + +def echo(message=None, file=None, nl=True, err=False, color=None): + """Prints a message plus a newline to the given file or stdout. On + first sight, this looks like the print function, but it has improved + support for handling Unicode and binary data that does not fail no + matter how badly configured the system is. + + Primarily it means that you can print binary data as well as Unicode + data on both 2.x and 3.x to the given file in the most appropriate way + possible. This is a very carefree function in that it will try its + best to not fail. As of Click 6.0 this includes support for unicode + output on the Windows console. + + In addition to that, if `colorama`_ is installed, the echo function will + also support clever handling of ANSI codes. Essentially it will then + do the following: + + - add transparent handling of ANSI color codes on Windows. + - hide ANSI codes automatically if the destination file is not a + terminal. + + .. _colorama: https://pypi.org/project/colorama/ + + .. versionchanged:: 6.0 + As of Click 6.0 the echo function will properly support unicode + output on the windows console. Not that click does not modify + the interpreter in any way which means that `sys.stdout` or the + print statement or function will still not provide unicode support. + + .. versionchanged:: 2.0 + Starting with version 2.0 of Click, the echo function will work + with colorama if it's installed. + + .. versionadded:: 3.0 + The `err` parameter was added. + + .. versionchanged:: 4.0 + Added the `color` flag. + + :param message: the message to print + :param file: the file to write to (defaults to ``stdout``) + :param err: if set to true the file defaults to ``stderr`` instead of + ``stdout``. This is faster and easier than calling + :func:`get_text_stderr` yourself. + :param nl: if set to `True` (the default) a newline is printed afterwards. + :param color: controls if the terminal supports ANSI colors or not. The + default is autodetection. + """ + if file is None: + if err: + file = _default_text_stderr() + else: + file = _default_text_stdout() + + # Convert non bytes/text into the native string type. + if message is not None and not isinstance(message, echo_native_types): + message = text_type(message) + + if nl: + message = message or u"" + if isinstance(message, text_type): + message += u"\n" + else: + message += b"\n" + + # If there is a message, and we're in Python 3, and the value looks + # like bytes, we manually need to find the binary stream and write the + # message in there. This is done separately so that most stream + # types will work as you would expect. Eg: you can write to StringIO + # for other cases. + if message and not PY2 and is_bytes(message): + binary_file = _find_binary_writer(file) + if binary_file is not None: + file.flush() + binary_file.write(message) + binary_file.flush() + return + + # ANSI-style support. If there is no message or we are dealing with + # bytes nothing is happening. If we are connected to a file we want + # to strip colors. If we are on windows we either wrap the stream + # to strip the color or we use the colorama support to translate the + # ansi codes to API calls. + if message and not is_bytes(message): + color = resolve_color_default(color) + if should_strip_ansi(file, color): + message = strip_ansi(message) + elif WIN: + if auto_wrap_for_ansi is not None: + file = auto_wrap_for_ansi(file) + elif not color: + message = strip_ansi(message) + + if message: + file.write(message) + file.flush() + + +def get_binary_stream(name): + """Returns a system stream for byte processing. This essentially + returns the stream from the sys module with the given name but it + solves some compatibility issues between different Python versions. + Primarily this function is necessary for getting binary streams on + Python 3. + + :param name: the name of the stream to open. Valid names are ``'stdin'``, + ``'stdout'`` and ``'stderr'`` + """ + opener = binary_streams.get(name) + if opener is None: + raise TypeError("Unknown standard stream '{}'".format(name)) + return opener() + + +def get_text_stream(name, encoding=None, errors="strict"): + """Returns a system stream for text processing. This usually returns + a wrapped stream around a binary stream returned from + :func:`get_binary_stream` but it also can take shortcuts on Python 3 + for already correctly configured streams. + + :param name: the name of the stream to open. Valid names are ``'stdin'``, + ``'stdout'`` and ``'stderr'`` + :param encoding: overrides the detected default encoding. + :param errors: overrides the default error mode. + """ + opener = text_streams.get(name) + if opener is None: + raise TypeError("Unknown standard stream '{}'".format(name)) + return opener(encoding, errors) + + +def open_file( + filename, mode="r", encoding=None, errors="strict", lazy=False, atomic=False +): + """This is similar to how the :class:`File` works but for manual + usage. Files are opened non lazy by default. This can open regular + files as well as stdin/stdout if ``'-'`` is passed. + + If stdin/stdout is returned the stream is wrapped so that the context + manager will not close the stream accidentally. This makes it possible + to always use the function like this without having to worry to + accidentally close a standard stream:: + + with open_file(filename) as f: + ... + + .. versionadded:: 3.0 + + :param filename: the name of the file to open (or ``'-'`` for stdin/stdout). + :param mode: the mode in which to open the file. + :param encoding: the encoding to use. + :param errors: the error handling for this file. + :param lazy: can be flipped to true to open the file lazily. + :param atomic: in atomic mode writes go into a temporary file and it's + moved on close. + """ + if lazy: + return LazyFile(filename, mode, encoding, errors, atomic=atomic) + f, should_close = open_stream(filename, mode, encoding, errors, atomic=atomic) + if not should_close: + f = KeepOpenFile(f) + return f + + +def get_os_args(): + """This returns the argument part of sys.argv in the most appropriate + form for processing. What this means is that this return value is in + a format that works for Click to process but does not necessarily + correspond well to what's actually standard for the interpreter. + + On most environments the return value is ``sys.argv[:1]`` unchanged. + However if you are on Windows and running Python 2 the return value + will actually be a list of unicode strings instead because the + default behavior on that platform otherwise will not be able to + carry all possible values that sys.argv can have. + + .. versionadded:: 6.0 + """ + # We can only extract the unicode argv if sys.argv has not been + # changed since the startup of the application. + if PY2 and WIN and _initial_argv_hash == _hash_py_argv(): + return _get_windows_argv() + return sys.argv[1:] + + +def format_filename(filename, shorten=False): + """Formats a filename for user display. The main purpose of this + function is to ensure that the filename can be displayed at all. This + will decode the filename to unicode if necessary in a way that it will + not fail. Optionally, it can shorten the filename to not include the + full path to the filename. + + :param filename: formats a filename for UI display. This will also convert + the filename into unicode without failing. + :param shorten: this optionally shortens the filename to strip of the + path that leads up to it. + """ + if shorten: + filename = os.path.basename(filename) + return filename_to_ui(filename) + + +def get_app_dir(app_name, roaming=True, force_posix=False): + r"""Returns the config folder for the application. The default behavior + is to return whatever is most appropriate for the operating system. + + To give you an idea, for an app called ``"Foo Bar"``, something like + the following folders could be returned: + + Mac OS X: + ``~/Library/Application Support/Foo Bar`` + Mac OS X (POSIX): + ``~/.foo-bar`` + Unix: + ``~/.config/foo-bar`` + Unix (POSIX): + ``~/.foo-bar`` + Win XP (roaming): + ``C:\Documents and Settings\<user>\Local Settings\Application Data\Foo Bar`` + Win XP (not roaming): + ``C:\Documents and Settings\<user>\Application Data\Foo Bar`` + Win 7 (roaming): + ``C:\Users\<user>\AppData\Roaming\Foo Bar`` + Win 7 (not roaming): + ``C:\Users\<user>\AppData\Local\Foo Bar`` + + .. versionadded:: 2.0 + + :param app_name: the application name. This should be properly capitalized + and can contain whitespace. + :param roaming: controls if the folder should be roaming or not on Windows. + Has no affect otherwise. + :param force_posix: if this is set to `True` then on any POSIX system the + folder will be stored in the home folder with a leading + dot instead of the XDG config home or darwin's + application support folder. + """ + if WIN: + key = "APPDATA" if roaming else "LOCALAPPDATA" + folder = os.environ.get(key) + if folder is None: + folder = os.path.expanduser("~") + return os.path.join(folder, app_name) + if force_posix: + return os.path.join(os.path.expanduser("~/.{}".format(_posixify(app_name)))) + if sys.platform == "darwin": + return os.path.join( + os.path.expanduser("~/Library/Application Support"), app_name + ) + return os.path.join( + os.environ.get("XDG_CONFIG_HOME", os.path.expanduser("~/.config")), + _posixify(app_name), + ) + + +class PacifyFlushWrapper(object): + """This wrapper is used to catch and suppress BrokenPipeErrors resulting + from ``.flush()`` being called on broken pipe during the shutdown/final-GC + of the Python interpreter. Notably ``.flush()`` is always called on + ``sys.stdout`` and ``sys.stderr``. So as to have minimal impact on any + other cleanup code, and the case where the underlying file is not a broken + pipe, all calls and attributes are proxied. + """ + + def __init__(self, wrapped): + self.wrapped = wrapped + + def flush(self): + try: + self.wrapped.flush() + except IOError as e: + import errno + + if e.errno != errno.EPIPE: + raise + + def __getattr__(self, attr): + return getattr(self.wrapped, attr)