Mercurial > repos > shellac > guppy_basecaller
diff env/lib/python3.7/site-packages/isodate/isotime.py @ 0:26e78fe6e8c4 draft
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
author | shellac |
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date | Sat, 02 May 2020 07:14:21 -0400 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/env/lib/python3.7/site-packages/isodate/isotime.py Sat May 02 07:14:21 2020 -0400 @@ -0,0 +1,158 @@ +############################################################################## +# Copyright 2009, Gerhard Weis +# All rights reserved. +# +# Redistribution and use in source and binary forms, with or without +# modification, are permitted provided that the following conditions are met: +# +# * Redistributions of source code must retain the above copyright notice, +# this list of conditions and the following disclaimer. +# * Redistributions in binary form must reproduce the above copyright notice, +# this list of conditions and the following disclaimer in the documentation +# and/or other materials provided with the distribution. +# * Neither the name of the authors nor the names of its contributors +# may be used to endorse or promote products derived from this software +# without specific prior written permission. +# +# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" +# AND ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE +# IMPLIED WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE +# ARE DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT OWNER OR CONTRIBUTORS BE +# LIABLE FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR +# CONSEQUENTIAL DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF +# SUBSTITUTE GOODS OR SERVICES; LOSS OF USE, DATA, OR PROFITS; OR BUSINESS +# INTERRUPTION) HOWEVER CAUSED AND ON ANY THEORY OF LIABILITY, WHETHER IN +# CONTRACT, STRICT LIABILITY, OR TORT +############################################################################## +''' +This modules provides a method to parse an ISO 8601:2004 time string to a +Python datetime.time instance. + +It supports all basic and extended formats including time zone specifications +as described in the ISO standard. +''' +import re +from decimal import Decimal +from datetime import time + +from isodate.isostrf import strftime, TIME_EXT_COMPLETE, TZ_EXT +from isodate.isoerror import ISO8601Error +from isodate.isotzinfo import TZ_REGEX, build_tzinfo + +TIME_REGEX_CACHE = [] +# used to cache regular expressions to parse ISO time strings. + + +def build_time_regexps(): + ''' + Build regular expressions to parse ISO time string. + + The regular expressions are compiled and stored in TIME_REGEX_CACHE + for later reuse. + ''' + if not TIME_REGEX_CACHE: + # ISO 8601 time representations allow decimal fractions on least + # significant time component. Command and Full Stop are both valid + # fraction separators. + # The letter 'T' is allowed as time designator in front of a time + # expression. + # Immediately after a time expression, a time zone definition is + # allowed. + # a TZ may be missing (local time), be a 'Z' for UTC or a string of + # +-hh:mm where the ':mm' part can be skipped. + # TZ information patterns: + # '' + # Z + # +-hh:mm + # +-hhmm + # +-hh => + # isotzinfo.TZ_REGEX + # 1. complete time: + # hh:mm:ss.ss ... extended format + TIME_REGEX_CACHE.append(re.compile(r"T?(?P<hour>[0-9]{2}):" + r"(?P<minute>[0-9]{2}):" + r"(?P<second>[0-9]{2}" + r"([,.][0-9]+)?)" + TZ_REGEX)) + # hhmmss.ss ... basic format + TIME_REGEX_CACHE.append(re.compile(r"T?(?P<hour>[0-9]{2})" + r"(?P<minute>[0-9]{2})" + r"(?P<second>[0-9]{2}" + r"([,.][0-9]+)?)" + TZ_REGEX)) + # 2. reduced accuracy: + # hh:mm.mm ... extended format + TIME_REGEX_CACHE.append(re.compile(r"T?(?P<hour>[0-9]{2}):" + r"(?P<minute>[0-9]{2}" + r"([,.][0-9]+)?)" + TZ_REGEX)) + # hhmm.mm ... basic format + TIME_REGEX_CACHE.append(re.compile(r"T?(?P<hour>[0-9]{2})" + r"(?P<minute>[0-9]{2}" + r"([,.][0-9]+)?)" + TZ_REGEX)) + # hh.hh ... basic format + TIME_REGEX_CACHE.append(re.compile(r"T?(?P<hour>[0-9]{2}" + r"([,.][0-9]+)?)" + TZ_REGEX)) + return TIME_REGEX_CACHE + + +def parse_time(timestring): + ''' + Parses ISO 8601 times into datetime.time objects. + + Following ISO 8601 formats are supported: + (as decimal separator a ',' or a '.' is allowed) + hhmmss.ssTZD basic complete time + hh:mm:ss.ssTZD extended compelte time + hhmm.mmTZD basic reduced accuracy time + hh:mm.mmTZD extended reduced accuracy time + hh.hhTZD basic reduced accuracy time + TZD is the time zone designator which can be in the following format: + no designator indicates local time zone + Z UTC + +-hhmm basic hours and minutes + +-hh:mm extended hours and minutes + +-hh hours + ''' + isotimes = build_time_regexps() + for pattern in isotimes: + match = pattern.match(timestring) + if match: + groups = match.groupdict() + for key, value in groups.items(): + if value is not None: + groups[key] = value.replace(',', '.') + tzinfo = build_tzinfo(groups['tzname'], groups['tzsign'], + int(groups['tzhour'] or 0), + int(groups['tzmin'] or 0)) + if 'second' in groups: + # round to microseconds if fractional seconds are more precise + second = Decimal(groups['second']).quantize(Decimal('.000001')) + microsecond = (second - int(second)) * int(1e6) + # int(...) ... no rounding + # to_integral() ... rounding + return time(int(groups['hour']), int(groups['minute']), + int(second), int(microsecond.to_integral()), + tzinfo) + if 'minute' in groups: + minute = Decimal(groups['minute']) + second = (minute - int(minute)) * 60 + microsecond = (second - int(second)) * int(1e6) + return time(int(groups['hour']), int(minute), int(second), + int(microsecond.to_integral()), tzinfo) + else: + microsecond, second, minute = 0, 0, 0 + hour = Decimal(groups['hour']) + minute = (hour - int(hour)) * 60 + second = (minute - int(minute)) * 60 + microsecond = (second - int(second)) * int(1e6) + return time(int(hour), int(minute), int(second), + int(microsecond.to_integral()), tzinfo) + raise ISO8601Error('Unrecognised ISO 8601 time format: %r' % timestring) + + +def time_isoformat(ttime, format=TIME_EXT_COMPLETE + TZ_EXT): + ''' + Format time strings. + + This method is just a wrapper around isodate.isostrf.strftime and uses + Time-Extended-Complete with extended time zone as default format. + ''' + return strftime(ttime, format)