Mercurial > repos > shellac > guppy_basecaller
diff env/bin/pyami_sendmail @ 5:9b1c78e6ba9c draft default tip
"planemo upload commit 6c0a8142489327ece472c84e558c47da711a9142"
author | shellac |
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date | Mon, 01 Jun 2020 08:59:25 -0400 |
parents | 79f47841a781 |
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--- a/env/bin/pyami_sendmail Thu May 14 16:47:39 2020 -0400 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,52 +0,0 @@ -#!/Users/pldms/Development/Projects/2020/david-matthews-galaxy/guppy_basecaller/env/bin/python3 -# Copyright (c) 2010 Chris Moyer http://coredumped.org/ -# -# Permission is hereby granted, free of charge, to any person obtaining a -# copy of this software and associated documentation files (the -# "Software"), to deal in the Software without restriction, including -# without limitation the rights to use, copy, modify, merge, publish, dis- -# tribute, sublicense, and/or sell copies of the Software, and to permit -# persons to whom the Software is furnished to do so, subject to the fol- -# lowing conditions: -# -# The above copyright notice and this permission notice shall be included -# in all copies or substantial portions of the Software. -# -# THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS -# OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABIL- -# ITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT -# SHALL THE AUTHOR BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, -# WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, -# OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS - -# -# Send Mail from a PYAMI instance, or anything that has a boto.cfg -# properly set up -# -VERSION="0.1" -usage = """%prog [options] -Sends whatever is on stdin to the recipient specified by your boto.cfg -or whoevery you specify in the options here. -""" - -if __name__ == "__main__": - from boto.utils import notify - import sys - from optparse import OptionParser - parser = OptionParser(version=VERSION, usage=usage) - parser.add_option("-t", "--to", help="Optional to address to send to (default from your boto.cfg)", action="store", default=None, dest="to") - parser.add_option("-s", "--subject", help="Optional Subject to send this report as", action="store", default="Report", dest="subject") - parser.add_option("-f", "--file", help="Optionally, read from a file instead of STDIN", action="store", default=None, dest="file") - parser.add_option("--html", help="HTML Format the email", action="store_true", default=False, dest="html") - parser.add_option("--no-instance-id", help="If set, don't append the instance id", action="store_false", default=True, dest="append_instance_id") - - (options, args) = parser.parse_args() - if options.file: - body = open(options.file, 'r').read() - else: - body = sys.stdin.read() - - if options.html: - notify(options.subject, html_body=body, to_string=options.to, append_instance_id=options.append_instance_id) - else: - notify(options.subject, body=body, to_string=options.to, append_instance_id=options.append_instance_id)