view env/lib/python3.7/site-packages/bioblend/_tests/TestGalaxyFolders.py @ 0:26e78fe6e8c4 draft

"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
author shellac
date Sat, 02 May 2020 07:14:21 -0400
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from . import GalaxyTestBase, test_util

FOO_DATA = 'foo\nbar\n'


class TestGalaxyFolders(GalaxyTestBase.GalaxyTestBase):

    def setUp(self):
        super(TestGalaxyFolders, self).setUp()
        self.name = 'automated test folder'
        self.library = self.gi.libraries.create_library(self.name, description='automated test', synopsis='automated test synopsis')
        self.folder = self.gi.folders.create_folder(self.library['root_folder_id'], self.name,
                                                    description="automatically created folder")

    def tearDown(self):
        self.gi.libraries.delete_library(self.library['id'])

    def test_create_folder(self):
        self.assertEqual(self.folder['name'], self.name)
        self.assertEqual(self.folder['description'], 'automatically created folder')

    def test_show_folder(self):
        f2 = self.gi.folders.show_folder(self.folder['id'])
        self.assertEqual(f2['id'], self.folder['id'])

    def test_show_folder_contents(self):
        f2 = self.gi.folders.show_folder(self.folder['id'], contents=True)
        self.assertIn('folder_contents', f2)
        self.assertIn('metadata', f2)
        # 'folder_name' key of metadata dict was added in release_16.01
        if 'folder_name' in f2['metadata']:
            self.assertEqual(self.name, f2['metadata']['folder_name'])

    @test_util.skip_unless_galaxy("release_15.01")
    def test_delete_folder(self):
        self.sub_folder = self.gi.folders.create_folder(self.folder['id'], self.name)
        self.gi.folders.delete_folder(self.sub_folder['id'])

    @test_util.skip_unless_galaxy("release_15.10")
    def test_update_folder(self):
        self.folder = self.gi.folders.update_folder(self.folder['id'], 'new-name', 'new-description')
        self.assertEqual(self.folder['name'], 'new-name')
        self.assertEqual(self.folder['description'], 'new-description')

    @test_util.skip_unless_galaxy("release_16.01")
    def test_get_set_permissions(self):
        empty_permission = {u'add_library_item_role_list': [], u'modify_folder_role_list': [], u'manage_folder_role_list': []}
        # They should be empty to start with
        self.assertEqual(
            self.gi.folders.get_permissions(self.folder['id'], scope='current'),
            empty_permission
        )
        self.assertEqual(
            self.gi.folders.get_permissions(self.folder['id'], scope='available'),
            empty_permission
        )
        # Then we'll add a role
        role = self.gi.roles.get_roles()[0]
        self.gi.folders.set_permissions(self.folder['id'], add_ids=[role['id']])
        self.assertTrue(
            role['id'] in
            self.gi.folders.get_permissions(self.folder['id'], scope='available')['add_library_item_role_list'][0]
        )