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view env/lib/python3.7/site-packages/cwltool/tests/wf/count-lines1-wf.cwl @ 0:26e78fe6e8c4 draft

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author shellac
date Sat, 02 May 2020 07:14:21 -0400
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#!/usr/bin/env cwl-runner
class: Workflow
cwlVersion: v1.0
requirements:
  ResourceRequirement:
    ramMin: 100

inputs:
  file1:
    type: File

outputs:
  count_output:
    type: int
    outputSource: step2/output

steps:
  step1:
    run: wc-tool.cwl
    in:
      file1: file1
    out: [output]

  step2:
    run: parseInt-tool.cwl
    in:
      file1: step1/output
    out: [output]