Mercurial > repos > shellac > guppy_basecaller
view env/lib/python3.7/site-packages/rdflib/query.py @ 0:26e78fe6e8c4 draft
"planemo upload commit c699937486c35866861690329de38ec1a5d9f783"
author | shellac |
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date | Sat, 02 May 2020 07:14:21 -0400 |
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import os import shutil import tempfile import warnings import types from urllib.parse import urlparse try: from io import BytesIO assert BytesIO except: from io import StringIO as BytesIO from . import py3compat __all__ = ['Processor', 'Result', 'ResultParser', 'ResultSerializer', 'ResultException'] class Processor(object): """ Query plugin interface. This module is useful for those wanting to write a query processor that can plugin to rdf. If you are wanting to execute a query you likely want to do so through the Graph class query method. """ def __init__(self, graph): pass def query(self, strOrQuery, initBindings={}, initNs={}, DEBUG=False): pass class UpdateProcessor(object): """ Update plugin interface. This module is useful for those wanting to write an update processor that can plugin to rdflib. If you are wanting to execute an update statement you likely want to do so through the Graph class update method. .. versionadded:: 4.0 """ def __init__(self, graph): pass def update(self, strOrQuery, initBindings={}, initNs={}): pass class ResultException(Exception): pass class EncodeOnlyUnicode(object): """ This is a crappy work-around for http://bugs.python.org/issue11649 """ def __init__(self, stream): self.__stream = stream def write(self, arg): if isinstance(arg, str): self.__stream.write(arg.encode("utf-8")) else: self.__stream.write(arg) def __getattr__(self, name): return getattr(self.__stream, name) class ResultRow(tuple): """ a single result row allows accessing bindings as attributes or with [] >>> from rdflib import URIRef, Variable >>> rr=ResultRow({ Variable('a'): URIRef('urn:cake') }, [Variable('a')]) >>> rr[0] rdflib.term.URIRef(%(u)s'urn:cake') >>> rr[1] Traceback (most recent call last): ... IndexError: tuple index out of range >>> rr.a rdflib.term.URIRef(%(u)s'urn:cake') >>> rr.b Traceback (most recent call last): ... AttributeError: b >>> rr['a'] rdflib.term.URIRef(%(u)s'urn:cake') >>> rr['b'] Traceback (most recent call last): ... KeyError: 'b' >>> rr[Variable('a')] rdflib.term.URIRef(%(u)s'urn:cake') .. versionadded:: 4.0 """ __doc__ = py3compat.format_doctest_out(__doc__) def __new__(cls, values, labels): instance = super(ResultRow, cls).__new__( cls, (values.get(v) for v in labels)) instance.labels = dict((str(x[1]), x[0]) for x in enumerate(labels)) return instance def __getattr__(self, name): if name not in self.labels: raise AttributeError(name) return tuple.__getitem__(self, self.labels[name]) def __getitem__(self, name): try: return tuple.__getitem__(self, name) except TypeError: if name in self.labels: return tuple.__getitem__(self, self.labels[name]) if str(name) in self.labels: # passing in variable object return tuple.__getitem__(self, self.labels[str(name)]) raise KeyError(name) def asdict(self): return dict((v, self[v]) for v in self.labels if self[v] != None) class Result(object): """ A common class for representing query result. There is a bit of magic here that makes this appear like different Python objects, depending on the type of result. If the type is "SELECT", iterating will yield lists of QueryRow objects If the type is "ASK", iterating will yield a single bool (or bool(result) will return the same bool) If the type is "CONSTRUCT" or "DESCRIBE" iterating will yield the triples. len(result) also works. """ def __init__(self, type_): if type_ not in ('CONSTRUCT', 'DESCRIBE', 'SELECT', 'ASK'): raise ResultException('Unknown Result type: %s' % type_) self.type = type_ self.vars = None self._bindings = None self._genbindings = None self.askAnswer = None self.graph = None def _get_bindings(self): if self._genbindings: self._bindings += list(self._genbindings) self._genbindings = None return self._bindings def _set_bindings(self, b): if isinstance(b, types.GeneratorType): self._genbindings = b self._bindings = [] else: self._bindings = b bindings = property( _get_bindings, _set_bindings, doc="a list of variable bindings as dicts") @staticmethod def parse(source, format='xml', **kwargs): from rdflib import plugin parser = plugin.get(format, ResultParser)() return parser.parse(source, **kwargs) def serialize( self, destination=None, encoding="utf-8", format='xml', **args): if self.type in ('CONSTRUCT', 'DESCRIBE'): return self.graph.serialize( destination, encoding=encoding, format=format, **args) """stolen wholesale from graph.serialize""" from rdflib import plugin serializer = plugin.get(format, ResultSerializer)(self) if destination is None: stream = BytesIO() stream2 = EncodeOnlyUnicode(stream) serializer.serialize(stream2, encoding=encoding, **args) return stream.getvalue() if hasattr(destination, "write"): stream = destination serializer.serialize(stream, encoding=encoding, **args) else: location = destination scheme, netloc, path, params, query, fragment = urlparse(location) if netloc != "": print(("WARNING: not saving as location" + "is not a local file reference")) return fd, name = tempfile.mkstemp() stream = os.fdopen(fd, 'wb') serializer.serialize(stream, encoding=encoding, **args) stream.close() if hasattr(shutil, "move"): shutil.move(name, path) else: shutil.copy(name, path) os.remove(name) def __len__(self): if self.type == 'ASK': return 1 elif self.type == 'SELECT': return len(self.bindings) else: return len(self.graph) def __bool__(self): if self.type == 'ASK': return self.askAnswer else: return len(self)>0 def __iter__(self): if self.type in ("CONSTRUCT", "DESCRIBE"): for t in self.graph: yield t elif self.type == 'ASK': yield self.askAnswer elif self.type == 'SELECT': # this iterates over ResultRows of variable bindings if self._genbindings: for b in self._genbindings: if b: # don't add a result row in case of empty binding {} self._bindings.append(b) yield ResultRow(b, self.vars) self._genbindings = None else: for b in self._bindings: if b: # don't add a result row in case of empty binding {} yield ResultRow(b, self.vars) def __getattr__(self, name): if self.type in ("CONSTRUCT", "DESCRIBE") and self.graph is not None: return self.graph.__getattr__(self, name) elif self.type == 'SELECT' and name == 'result': warnings.warn( "accessing the 'result' attribute is deprecated." " Iterate over the object instead.", DeprecationWarning, stacklevel=2) # copied from __iter__, above return [(tuple(b[v] for v in self.vars)) for b in self.bindings] else: raise AttributeError( "'%s' object has no attribute '%s'" % (self, name)) def __eq__(self, other): try: if self.type != other.type: return False if self.type == 'ASK': return self.askAnswer == other.askAnswer elif self.type == 'SELECT': return self.vars == other.vars \ and self.bindings == other.bindings else: return self.graph == other.graph except: return False class ResultParser(object): def __init__(self): pass def parse(self, source, **kwargs): """return a Result object""" pass # abstract class ResultSerializer(object): def __init__(self, result): self.result = result def serialize(self, stream, encoding="utf-8", **kwargs): """return a string properly serialized""" pass # abstract