Mercurial > repos > shellac > guppy_basecaller
view env/bin/instance_events @ 3:758bc20232e8 draft
"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
author | shellac |
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date | Thu, 14 May 2020 16:20:52 -0400 |
parents | 26e78fe6e8c4 |
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#!/Users/pldms/Development/Projects/2020/david-matthews-galaxy/guppy_basecaller/env/bin/python3 # Copyright (c) 2011 Jim Browne http://www.42lines.net # Borrows heavily from boto/bin/list_instances which has no attribution # # Permission is hereby granted, free of charge, to any person obtaining a # copy of this software and associated documentation files (the # "Software"), to deal in the Software without restriction, including # without limitation the rights to use, copy, modify, merge, publish, dis- # tribute, sublicense, and/or sell copies of the Software, and to permit # persons to whom the Software is furnished to do so, subject to the fol- # lowing conditions: # # The above copyright notice and this permission notice shall be included # in all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS # OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABIL- # ITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT # SHALL THE AUTHOR BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, # WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS VERSION="0.1" usage = """%prog [options] Options: -h, --help show help message (including options list) and exit """ from operator import itemgetter HEADERS = { 'ID': {'get': itemgetter('id'), 'length':14}, 'Zone': {'get': itemgetter('zone'), 'length':14}, 'Hostname': {'get': itemgetter('dns'), 'length':20}, 'Code': {'get': itemgetter('code'), 'length':18}, 'Description': {'get': itemgetter('description'), 'length':30}, 'NotBefore': {'get': itemgetter('not_before'), 'length':25}, 'NotAfter': {'get': itemgetter('not_after'), 'length':25}, 'T:': {'length': 30}, } def get_column(name, event=None): if name.startswith('T:'): return event[name] return HEADERS[name]['get'](event) def list(region, headers, order, completed): """List status events for all instances in a given region""" import re ec2 = boto.connect_ec2(region=region) reservations = ec2.get_all_reservations() instanceinfo = {} events = {} displaytags = [ x for x in headers if x.startswith('T:') ] # Collect the tag for every possible instance for res in reservations: for instance in res.instances: iid = instance.id instanceinfo[iid] = {} for tagname in displaytags: _, tag = tagname.split(':', 1) instanceinfo[iid][tagname] = instance.tags.get(tag,'') instanceinfo[iid]['dns'] = instance.public_dns_name stats = ec2.get_all_instance_status() for stat in stats: if stat.events: for event in stat.events: events[stat.id] = {} events[stat.id]['id'] = stat.id events[stat.id]['dns'] = instanceinfo[stat.id]['dns'] events[stat.id]['zone'] = stat.zone for tag in displaytags: events[stat.id][tag] = instanceinfo[stat.id][tag] events[stat.id]['code'] = event.code events[stat.id]['description'] = event.description events[stat.id]['not_before'] = event.not_before events[stat.id]['not_after'] = event.not_after if completed and re.match('^\[Completed\]',event.description): events[stat.id]['not_before'] = 'Completed' events[stat.id]['not_after'] = 'Completed' # Create format string format_string = "" for h in headers: if h.startswith('T:'): format_string += "%%-%ds" % HEADERS['T:']['length'] else: format_string += "%%-%ds" % HEADERS[h]['length'] print format_string % headers print "-" * len(format_string % headers) for instance in sorted(events, key=lambda ev: get_column(order, events[ev])): e = events[instance] print format_string % tuple(get_column(h, e) for h in headers) if __name__ == "__main__": import boto from optparse import OptionParser from boto.ec2 import regions parser = OptionParser(version=VERSION, usage=usage) parser.add_option("-a", "--all", help="check all regions", dest="all", default=False,action="store_true") parser.add_option("-r", "--region", help="region to check (default us-east-1)", dest="region", default="us-east-1") parser.add_option("-H", "--headers", help="Set headers (use 'T:tagname' for including tags)", default=None, action="store", dest="headers", metavar="ID,Zone,Hostname,Code,Description,NotBefore,NotAfter,T:Name") parser.add_option("-S", "--sort", help="Header for sort order", default=None, action="store", dest="order",metavar="HeaderName") parser.add_option("-c", "--completed", help="List time fields as \"Completed\" for completed events (Default: false)", default=False, action="store_true", dest="completed") (options, args) = parser.parse_args() if options.headers: headers = tuple(options.headers.split(',')) else: headers = ('ID', 'Zone', 'Hostname', 'Code', 'NotBefore', 'NotAfter') if options.order: order = options.order else: order = 'ID' if options.all: for r in regions(): print "Region %s" % r.name list(r, headers, order, options.completed) else: # Connect the region for r in regions(): if r.name == options.region: region = r break else: print "Region %s not found." % options.region sys.exit(1) list(r, headers, order, options.completed)