Mercurial > repos > shellac > guppy_basecaller
view env/lib/python3.7/site-packages/bioblend/_tests/CloudmanTestBase.py @ 3:758bc20232e8 draft
"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
author | shellac |
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date | Thu, 14 May 2020 16:20:52 -0400 |
parents | 26e78fe6e8c4 |
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""" Tests the functionality of the Blend CloudMan API. These tests require working credentials to supported cloud infrastructure. """ import os from bioblend.util import Bunch from . import test_util from .test_util import unittest class CloudmanTestBase(unittest.TestCase): @classmethod @test_util.skip_unless_cloudman() def setUpClass(cls): if os.environ.get('BIOBLEND_CLOUD_TYPE') == 'EC2': cls.access_key = os.environ['BIOBLEND_ACCESS_KEY'] cls.secret_key = os.environ['BIOBLEND_SECRET_KEY'] cls.cluster_name = 'Blend CloudMan' cls.ami_id = os.environ['BIOBLEND_AMI_ID'] cls.instance_type = 'm1.small' cls.password = 'password' cls.cloud_metadata = Bunch( id='1', # for compatibility w/ DB representation name="Amazon", cloud_type="ec2", bucket_default="cloudman", region_name="us-east-1", region_endpoint="ec2.amazonaws.com", ec2_port="", ec2_conn_path="/", cidr_range="", is_secure=True, s3_host="s3.amazonaws.com", s3_port="", s3_conn_path='/') else: # Assume OpenStack/NeCTAR cls.access_key = os.environ['BIOBLEND_ACCESS_KEY'] cls.secret_key = os.environ['BIOBLEND_SECRET_KEY'] cls.cloud_metadata = Bunch( id='-1', name="NeCTAR", cloud_type='openstack', bucket_default='cloudman-os', region_name='melbourne', region_endpoint='nova.rc.nectar.org.au', ec2_port=8773, ec2_conn_path='/services/Cloud', cidr_range='115.146.92.0/22', is_secure=True, s3_host='swift.rc.nectar.org.au', s3_port=8888, s3_conn_path='/') cls.cluster_name = 'Blend CloudMan' cls.ami_id = os.environ['BIOBLEND_AMI_ID'] cls.instance_type = 'm1.small' cls.password = 'password' @classmethod @test_util.skip_unless_cloudman() def tearDownClass(cls): try: # TODO: cloudman's terminate method has a bug. Needs fix cls.cmi.terminate(delete_cluster=True) except Exception: pass