Mercurial > repos > shellac > guppy_basecaller
view env/lib/python3.7/site-packages/boto/glacier/utils.py @ 3:758bc20232e8 draft
"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
author | shellac |
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date | Thu, 14 May 2020 16:20:52 -0400 |
parents | 26e78fe6e8c4 |
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# Copyright (c) 2012 Amazon.com, Inc. or its affiliates. All Rights Reserved # # Permission is hereby granted, free of charge, to any person obtaining a # copy of this software and associated documentation files (the # "Software"), to deal in the Software without restriction, including # without limitation the rights to use, copy, modify, merge, publish, dis- # tribute, sublicense, and/or sell copies of the Software, and to permit # persons to whom the Software is furnished to do so, subject to the fol- # lowing conditions: # # The above copyright notice and this permission notice shall be included # in all copies or substantial portions of the Software. # # THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS # OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABIL- # ITY, FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT # SHALL THE AUTHOR BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, # WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, # OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS # IN THE SOFTWARE. # import hashlib import math import binascii from boto.compat import six _MEGABYTE = 1024 * 1024 DEFAULT_PART_SIZE = 4 * _MEGABYTE MAXIMUM_NUMBER_OF_PARTS = 10000 def minimum_part_size(size_in_bytes, default_part_size=DEFAULT_PART_SIZE): """Calculate the minimum part size needed for a multipart upload. Glacier allows a maximum of 10,000 parts per upload. It also states that the maximum archive size is 10,000 * 4 GB, which means the part size can range from 1MB to 4GB (provided it is one 1MB multiplied by a power of 2). This function will compute what the minimum part size must be in order to upload a file of size ``size_in_bytes``. It will first check if ``default_part_size`` is sufficient for a part size given the ``size_in_bytes``. If this is not the case, then the smallest part size than can accomodate a file of size ``size_in_bytes`` will be returned. If the file size is greater than the maximum allowed archive size of 10,000 * 4GB, a ``ValueError`` will be raised. """ # The default part size (4 MB) will be too small for a very large # archive, as there is a limit of 10,000 parts in a multipart upload. # This puts the maximum allowed archive size with the default part size # at 40,000 MB. We need to do a sanity check on the part size, and find # one that works if the default is too small. part_size = _MEGABYTE if (default_part_size * MAXIMUM_NUMBER_OF_PARTS) < size_in_bytes: if size_in_bytes > (4096 * _MEGABYTE * 10000): raise ValueError("File size too large: %s" % size_in_bytes) min_part_size = size_in_bytes / 10000 power = 3 while part_size < min_part_size: part_size = math.ldexp(_MEGABYTE, power) power += 1 part_size = int(part_size) else: part_size = default_part_size return part_size def chunk_hashes(bytestring, chunk_size=_MEGABYTE): chunk_count = int(math.ceil(len(bytestring) / float(chunk_size))) hashes = [] for i in range(chunk_count): start = i * chunk_size end = (i + 1) * chunk_size hashes.append(hashlib.sha256(bytestring[start:end]).digest()) if not hashes: return [hashlib.sha256(b'').digest()] return hashes def tree_hash(fo): """ Given a hash of each 1MB chunk (from chunk_hashes) this will hash together adjacent hashes until it ends up with one big one. So a tree of hashes. """ hashes = [] hashes.extend(fo) while len(hashes) > 1: new_hashes = [] while True: if len(hashes) > 1: first = hashes.pop(0) second = hashes.pop(0) new_hashes.append(hashlib.sha256(first + second).digest()) elif len(hashes) == 1: only = hashes.pop(0) new_hashes.append(only) else: break hashes.extend(new_hashes) return hashes[0] def compute_hashes_from_fileobj(fileobj, chunk_size=1024 * 1024): """Compute the linear and tree hash from a fileobj. This function will compute the linear/tree hash of a fileobj in a single pass through the fileobj. :param fileobj: A file like object. :param chunk_size: The size of the chunks to use for the tree hash. This is also the buffer size used to read from `fileobj`. :rtype: tuple :return: A tuple of (linear_hash, tree_hash). Both hashes are returned in hex. """ # Python 3+, not binary if six.PY3 and hasattr(fileobj, 'mode') and 'b' not in fileobj.mode: raise ValueError('File-like object must be opened in binary mode!') linear_hash = hashlib.sha256() chunks = [] chunk = fileobj.read(chunk_size) while chunk: # It's possible to get a file-like object that has no mode (checked # above) and returns something other than bytes (e.g. str). So here # we try to catch that and encode to bytes. if not isinstance(chunk, bytes): chunk = chunk.encode(getattr(fileobj, 'encoding', '') or 'utf-8') linear_hash.update(chunk) chunks.append(hashlib.sha256(chunk).digest()) chunk = fileobj.read(chunk_size) if not chunks: chunks = [hashlib.sha256(b'').digest()] return linear_hash.hexdigest(), bytes_to_hex(tree_hash(chunks)) def bytes_to_hex(str_as_bytes): return binascii.hexlify(str_as_bytes) def tree_hash_from_str(str_as_bytes): """ :type str_as_bytes: str :param str_as_bytes: The string for which to compute the tree hash. :rtype: str :return: The computed tree hash, returned as hex. """ return bytes_to_hex(tree_hash(chunk_hashes(str_as_bytes))) class ResettingFileSender(object): def __init__(self, archive): self._archive = archive self._starting_offset = archive.tell() def __call__(self, connection, method, path, body, headers): try: connection.request(method, path, self._archive, headers) return connection.getresponse() finally: self._archive.seek(self._starting_offset)