Mercurial > repos > shellac > guppy_basecaller
view env/lib/python3.7/site-packages/cwltool/tests/wf/revtool.cwl @ 3:758bc20232e8 draft
"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
author | shellac |
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date | Thu, 14 May 2020 16:20:52 -0400 |
parents | 26e78fe6e8c4 |
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#!/usr/bin/env cwl-runner # # Simplest example command line program wrapper for the Unix tool "rev". # class: CommandLineTool cwlVersion: v1.0 doc: "Reverse each line using the `rev` command" $schemas: - empty.ttl # The "inputs" array defines the structure of the input object that describes # the inputs to the underlying program. Here, there is one input field # defined that will be called "input" and will contain a "File" object. # # The input binding indicates that the input value should be turned into a # command line argument. In this example inputBinding is an empty object, # which indicates that the file name should be added to the command line at # a default location. inputs: revtool_input: type: File inputBinding: {} # The "outputs" array defines the structure of the output object that # describes the outputs of the underlying program. Here, there is one # output field defined that will be called "output", must be a "File" type, # and after the program executes, the output value will be the file # output.txt in the designated output directory. outputs: revtool_output: type: File outputBinding: glob: output.txt # The actual program to execute. baseCommand: rev # Specify that the standard output stream must be redirected to a file called # output.txt in the designated output directory. stdout: output.txt