view env/lib/python3.7/site-packages/cwltool/tests/wf/echo.cwl @ 4:79f47841a781 draft

"planemo upload commit 2a0fe2cc28b09e101d37293e53e82f61762262ec"
author shellac
date Thu, 14 May 2020 16:47:39 -0400
parents 26e78fe6e8c4
children
line wrap: on
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#!/usr/bin/env cwl-runner
class: CommandLineTool
cwlVersion: v1.0
inputs:
  r: string
  script:
    type: string
    default: |
      from __future__ import print_function
      import sys
      print(sys.argv[1])
      if sys.argv[1] == "2":
        exit(1)
      else:
        f = open("foo"+sys.argv[1]+".txt", "wb")
        content = sys.argv[1]+"\n"
        f.write(content.encode('utf-8'))
      if sys.argv[1] == "5":
        exit(1)
outputs:
  out:
    type: File
    outputBinding:
      glob: foo$(inputs.r).txt
arguments: [python, -c, $(inputs.script), $(inputs.r)]