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+Metadata-Version: 2.1
+Name: gxformat2
+Version: 0.15.0
+Summary: Galaxy Workflow Format 2 Descriptions
+Home-page: https://github.com/galaxyproject/gxformat2
+Author: Galaxy Project and Community
+Author-email: jmchilton@gmail.com
+License: AFL
+Keywords: galaxy
+Platform: UNKNOWN
+Classifier: Development Status :: 5 - Production/Stable
+Classifier: Intended Audience :: Developers
+Classifier: Environment :: Console
+Classifier: License :: OSI Approved :: Academic Free License (AFL)
+Classifier: Operating System :: POSIX
+Classifier: Topic :: Software Development
+Classifier: Topic :: Software Development :: Code Generators
+Classifier: Topic :: Software Development :: Testing
+Classifier: Natural Language :: English
+Classifier: Programming Language :: Python :: 3
+Classifier: Programming Language :: Python :: 3.5
+Classifier: Programming Language :: Python :: 3.6
+Classifier: Programming Language :: Python :: 3.7
+Classifier: Programming Language :: Python :: 3.8
+Requires-Dist: six (>=1.9.0)
+Requires-Dist: bioblend
+Requires-Dist: pyyaml
+
+
+.. image:: https://readthedocs.org/projects/gxformat2/badge/?version=latest
+   :target: https://gxformat2.readthedocs.io/en/latest/
+
+.. image:: https://badge.fury.io/py/gxformat2.svg
+   :target: https://pypi.python.org/pypi/gxformat2/
+
+.. image:: https://github.com/galaxyproject/gxformat2/workflows/Python%20CI/badge.svg
+   :target: https://github.com/galaxyproject/gxformat2/actions?query=workflow%3A%22Python+CI%22
+
+.. image:: https://github.com/galaxyproject/gxformat2/workflows/Java%20CI/badge.svg
+   :target: https://github.com/galaxyproject/gxformat2/actions?query=workflow%3A%22Java+CI%22
+
+.. image:: https://img.shields.io/badge/latest%20schema-v19.09-blue
+   :target: http://galaxyproject.github.io/gxformat2/v19_09.html
+
+Format 2
+--------------
+
+This package defines a high-level Galaxy_ workflow description termed "Format
+2". The current schema version is v19_09 and the schema can be found
+[here](http://galaxyproject.github.io/gxformat2/v19_09.html). This version of
+workflow format can be consumed by Galaxy versions 19.09, 20.01, 20.05 and the
+the forthcoming 20.09.
+
+The Format 2 workflow description is still somewhat experimental and may
+yet change in small potentially backward incompatible ways until the format is
+exported by Galaxy by default.
+
+The traditional Galaxy workflow description (files ending in .ga extension
+sometimes called native workflows in this project) was not designed to be
+concise and is neither readily human readable or human writable. Galaxy
+workflow Format 2 is being designed to addresses all three of these limitations.
+While also moving Galaxy's workflow description language toward standards such
+as the Common Workflow Language.
+
+gxformat2
+--------------
+
+This Python project can be installed from PyPI using ``pip``.
+
+::
+
+    $ pip install gxformat2
+
+Checkout the project tests or how it used in projects such as Planemo and
+Galaxy to see how to use the gxformat2 library. Reference documentation for
+the `modules <https://gxformat2.readthedocs.io/en/latest/py-modindex.html>`__
+can be found as part of the project's documentation.
+
+This project also includes various scripts for working with Galaxy workflows.
+Checkout their help for more information.
+
+::
+
+    $ gxwf-lint --help
+    $ gxwf-viz --help
+    $ gxwf-abstract-export --help
+
+This library and associated scripts are licensed under the Academic Free License
+version 3.0.
+
+.. _Galaxy: http://galaxyproject.org/
+.. _GitHub: https://github.com/
+.. _Travis CI: http://travis-ci.org/
+
+
+
+
+History
+-------
+
+.. to_doc
+
+---------------------
+0.15.0 (2020-08-12)
+---------------------
+
+* Lint types of default values.
+* Fix bugs in schema related to differing type names between Galaxy and CWL.
+* Generate cwl v1.2 instead of cwl v1.2.0-dev5 release now that it has been released.
+* More testing of linting and CWL 1.2 export.
+
+---------------------
+0.14.0 (2020-08-11)
+---------------------
+
+* Bug fix where native export had explicit outputs declaration still in it (wouldn't break anything, but
+  was deceptive).
+* Fixes for experimental CWL 1.2 abstract export.
+* Improve script structures and documentation.
+* Improve code structure - add more types, make more things immutable, mention mutability in docstrings.
+
+---------------------
+0.13.1 (2020-08-03)
+---------------------
+
+* Improve package structure - publish fixed sphinx docs, fix readme badges, add mypy typing support.
+
+---------------------
+0.13.0 (2020-07-30)
+---------------------
+
+* Add experimental export to CWL 1.2 using new abstract Operation classes.
+
+---------------------
+0.12.0 (2020-07-27)
+---------------------
+
+* Drop support for Python 2 - to support next bullet.
+* Update schema parser for recent changes to schema salad.
+
+---------------------
+0.11.4 (2020-07-27)
+---------------------
+
+* Added abstraction for uniform access to workflow outputs across formats.
+
+---------------------
+0.11.3 (2020-07-23)
+---------------------
+
+* Bug fixes for exporting newer input concepts from native to Format 2.
+* Added abstraction for uniform access to workflow inputs across formats.
+
+---------------------
+0.11.2 (2020-07-22)
+---------------------
+
+* Rework cytoscape and helpers for reuse from Planemo.
+* Rev markdown validator for and from latest Galaxy changes.
+
+---------------------
+0.11.1 (2020-02-25)
+---------------------
+
+* Bug fix for gxwf-lint invocation from setup.py installed script.
+
+---------------------
+0.11.0 (2020-02-25)
+---------------------
+
+* Validate Galaxy Markdown in workflow reports as part of linting.
+* Improved null handling in native ga workflow linting.
+* Enhancements to workflow linting from Python. Lint for lack of documentation,
+  tools using the test toolshed, and implement special linting for training
+  material workflows to ensure a tag matches the workflow topic.
+* Add gxwf-viz script that produces a cytoscape visualization of a workflow.
+
+---------------------
+0.10.1 (2019-12-07)
+---------------------
+
+* Bug fix to handle outputs without labels in Format 2 - they
+  don't validate per se but they are important for testing in the
+  Galaxy framework.
+
+---------------------
+0.10.0 (2019-12-06)
+---------------------
+
+* Implement scheam, validation, linting (for Format 2 and .ga).
+* Handle new reports field in Galaxy 19.09 workflows.
+* Numerous fixes for conversiion to and from native workflows.
+* Numerous new test cases.
+* Implement Java project for valiating and linting both kinds of workflows.
+
+---------------------
+0.9.0 (2019-07-08)
+---------------------
+
+* Implement default values in gxformat2.
+
+---------------------
+0.8.4 (2019-06-24)
+---------------------
+
+* Fix output IDs of 0.    
+
+---------------------
+0.8.3 (2019-05-23)
+---------------------
+
+* Implement set_columns PJA.
+
+---------------------
+0.8.2 (2019-03-16)
+---------------------
+
+* Allow another API return option for experimental tool creation API.
+
+---------------------
+0.8.1 (2019-03-11)
+---------------------
+
+* Implement change datatype PJA.
+
+---------------------
+0.8.0 (2018-11-01)
+---------------------
+
+* Implement experimental CWL-style step defaults (see Galaxy PR #6850).
+
+---------------------
+0.7.1 (2018-10-09)
+---------------------
+
+* Various small fixes for changes in 0.7.1.
+
+---------------------
+0.7.0 (2018-10-08)
+---------------------
+
+* Add some basic test cases.
+* Allow ID-map style listing of steps.
+* Ordered load (in addition to existing dump functionality) or ordering of steps in ID-map style variant works.
+* Allow CWL-style $graph defs that can define multiple workflows in a single file.
+* Initial work on de-duplicating subworkflow definitions on import.
+* Fix position handling while exporting workflow.
+
+---------------------
+0.6.1 (2018-10-01)
+---------------------
+
+* Fix export of non-data parameters and implicit workflow connections.
+
+---------------------
+0.6.0 (2018-10-01)
+---------------------
+
+* Various fixes, allow id map style workflow input definitions.
+
+---------------------
+0.5.0 (2018-10-01)
+---------------------
+
+* More fixes for PJA, add the ``doc`` keyword to format 2 workflows to match CWL workflows. Map to and from native Galaxy workflows as annotations.
+
+---------------------
+0.4.0 (2018-10-01)
+---------------------
+
+* Fixes for exporting PJA when exporting workflows from native .ga to format 2.
+
+---------------------
+0.3.2 (2018-10-01)
+---------------------
+
+* Fixes for exporting workflow outputs from native .ga to format 2, support for modern map style output definitions like CWL 1.0.
+
+---------------------
+0.3.1 (2018-10-01)
+---------------------
+
+* Fixes for exporting subworkflows from native .ga to format 2.
+
+---------------------
+0.3.0 (2018-09-30)
+---------------------
+
+* More cwl style inputs, initial work on conversion from native workflows, various small fixes and tweaks.
+
+---------------------
+0.2.0 (2018-02-21)
+---------------------
+
+* Bring in latest Galaxy updates - Python 3 fixes, safe YAML usage, and more PJA implemented.
+
+---------------------
+0.1.1 (2016-08-15)
+---------------------
+
+* Fix one Python 3 incompatibility.
+
+---------------------
+0.1.0 (2016-05-02)
+---------------------
+
+* Initial version - code from Galaxy's test framework with changes
+  based on planemo testing.
+
+