Mercurial > repos > shians > shrnaseq

comparison hairpinTool.xml @ 7:91e411fcdecc

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Version 1.0.8 - Added differential representation counts table
author shian_su <registertonysu@gmail.com>
date Wed, 23 Apr 2014 14:05:26 +1000
parents 3d04308a99f9
children 548802b3492f
comparison
equal deleted inserted replaced
6:3d04308a99f9 7:91e411fcdecc
1 <tool id="shRNAseq" name="shRNAseq Tool" version="1.0.7"> 1 <tool id="shRNAseq" name="shRNAseq Tool" version="1.0.8">
2 <description> 2 <description>
3 Analyse hairpin differential representation using edgeR 3 Analyse hairpin differential representation using edgeR
4 </description> 4 </description>
5 5
6 <requirements> 6 <requirements>
240 Given tables containing information about the hairpins and their associated 240 Given tables containing information about the hairpins and their associated
241 barcodes, information about the samples and fastq file containing the hairpin 241 barcodes, information about the samples and fastq file containing the hairpin
242 reads. This tool will generate plots and tables for the analysis of differential 242 reads. This tool will generate plots and tables for the analysis of differential
243 representation. 243 representation.
244 244
245 .. class:: infomark
246
247 A tutorial of how to use this tool is available at:
248 http://bioinf.wehi.edu.au/shRNAseq/galaxy.html
249
245 ----- 250 -----
246 251
247 .. class:: infomark 252 .. class:: infomark
248 253
249 **INPUTS** 254 **INPUTS**