Mercurial > repos > shians > shrnaseq

comparison hairpinTool.xml @ 9:f1076bfb0ed1

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- Fixed tool to actually make use of barcode location options - Stored variables now properly used in processHairpinReads function
author shian_su <registertonysu@gmail.com>
date Wed, 30 Jul 2014 15:13:45 +1000
parents 548802b3492f
children 8923d4ea858b
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8:548802b3492f 9:f1076bfb0ed1
1 <tool id="shRNAseq" name="shRNAseq Tool" version="1.0.9"> 1 <tool id="shRNAseq" name="shRNAseq Tool" version="1.0.11">
2 <description> 2 <description>
3 Analyse hairpin differential representation using edgeR 3 Analyse hairpin differential representation using edgeR
4 </description> 4 </description>
5 5
6 <requirements> 6 <requirements>
7 <requirement type="R-module" version="3.5.27">edgeR</requirement> 7 <requirement type="R-module" version="3.6.2">edgeR</requirement>
8 <requirement type="R-module" version="3.18.13">limma</requirement> 8 <requirement type="R-module" version="3.20.7">limma</requirement>
9 <requirement type="package" version="3.0.3">R_3_0_3</requirement>
9 </requirements> 10 </requirements>
10 11
11 <stdio> 12 <stdio>
12 <exit_code range="1:" level="fatal" description="Tool exception" /> 13 <exit_code range="1:" level="fatal" description="Tool exception" />
13 </stdio> 14 </stdio>