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author shian_su <registertonysu@gmail.com>
date Tue, 16 Dec 2014 14:41:34 +1100
parents 7a80e9ec63cb
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0:7a80e9ec63cb 1:b2fe55fd0651
338 338
339 * Law, CW, Chen, Y, Shi, W, and Smyth, GK (2014). Voom: 339 * Law, CW, Chen, Y, Shi, W, and Smyth, GK (2014). Voom:
340 precision weights unlock linear model analysis tools for 340 precision weights unlock linear model analysis tools for
341 RNA-seq read counts. Genome Biology 15, R29. 341 RNA-seq read counts. Genome Biology 15, R29.
342 342
343 * Ritchie, M. E., Diyagama, D., Neilson, J., van Laar, R., Dobrovic,
344 A., Holloway, A., and Smyth, G. K. (2006). Empirical array quality weights
345 for microarray data. BMC Bioinformatics 7, Article 261.
346
343 .. class:: infomark 347 .. class:: infomark
344 348
345 edgeR 349 edgeR
346 350
347 Please cite the first paper for the software itself and the other papers for 351 Please cite the first paper for the software itself and the other papers for
361 365
362 * McCarthy DJ, Chen Y and Smyth GK (2012). Differential expression analysis 366 * McCarthy DJ, Chen Y and Smyth GK (2012). Differential expression analysis
363 of multifactor RNA-Seq experiments with respect to biological variation. 367 of multifactor RNA-Seq experiments with respect to biological variation.
364 Nucleic Acids Research 40, 4288-4297 368 Nucleic Acids Research 40, 4288-4297
365 369
366 Report problems to: su.s@wehi.edu.au 370 Please report problems or suggestions to: su.s@wehi.edu.au
367 371
368 .. _edgeR: http://www.bioconductor.org/packages/release/bioc/html/edgeR.html 372 .. _edgeR: http://www.bioconductor.org/packages/release/bioc/html/edgeR.html
369 .. _limma: http://www.bioconductor.org/packages/release/bioc/html/limma.html 373 .. _limma: http://www.bioconductor.org/packages/release/bioc/html/limma.html
370 374
371 </help> 375 </help>