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comparison snippy.xml @ 5:ff31f16f5dfd draft

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Added genbank support
author simon-gladman
date Tue, 07 Jun 2016 03:41:47 -0400
parents f0b139f53e1f
children 15f5a3074012
comparison
equal deleted inserted replaced
4:f0b139f53e1f 5:ff31f16f5dfd
127 </data> 127 </data>
128 </outputs> 128 </outputs>
129 129
130 <tests> 130 <tests>
131 <test> 131 <test>
132 <param name="ref_type_selector" value="fasta" />
132 <param name="ref" value="Ecoli.fna" ftype="fasta" /> 133 <param name="ref" value="Ecoli.fna" ftype="fasta" />
133 <param name="fastq_input_selector" value="paired" /> 134 <param name="fastq_input_selector" value="paired" />
134 <param name="fastq_input1" ftype="fastq" value="reads_1.fq" /> 135 <param name="fastq_input1" ftype="fastq" value="reads_1.fq" />
135 <param name="fastq_input2" ftype="fastq" value="reads_2.fq" /> 136 <param name="fastq_input2" ftype="fastq" value="reads_2.fq" />
136 <output name="snpsum" ftype="tabular" file="test/snps.txt" lines-diff="5" /> 137 <output name="snpsum" ftype="tabular" file="test/snps.txt" lines-diff="5" />