Mercurial > repos > simon-gladman > snippy

view tool_dependencies.xml @ 5:ff31f16f5dfd draft

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Added genbank support
author simon-gladman
date Tue, 07 Jun 2016 03:41:47 -0400
parents 8b69e4b18a5f
children 15f5a3074012
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<?xml version="1.0"?>
<tool_dependency>
    <package name="snippy" version="3.0">
        <repository changeset_revision="f8b5ebbd6121" name="package_snippy_3_0" owner="simon-gladman" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="samtools" version="1.2">
        <repository changeset_revision="f6ae3ba3f3c1" name="package_samtools_1_2" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="freebayes" version="0_9_20_b040236">
        <repository changeset_revision="059e6e3d99cc" name="package_freebayes_0_9_20_b040236" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="bwa" version="0.7.12">
        <repository changeset_revision="6af9b24ddeee" name="package_bwa_0_7_12" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="vcfftools" version="0.1.11">
        <repository changeset_revision="710efaae2ff8" name="package_vcftools_0_1_11" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="snpeff" version="4.0">
        <repository changeset_revision="792d8f4485fb" name="package_snpeff_4_0" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
    <package name="vcflib" version="8a5602bf07">
        <repository changeset_revision="7e67466b033e" name="package_vcflib_8a5602bf07" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
    </package>
</tool_dependency>