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comparison pyPRADA_1.2/conf.txt @ 1:03815b87eb65 draft

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author siyuan
date Fri, 21 Feb 2014 18:08:37 -0500
parents acc2ca1a3ba4
children 74f6c4fcab2f
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0:acc2ca1a3ba4 1:03815b87eb65
19 txcat_file = /RIS/home/verhaakgroup/PRADA/hg19broad/Ensembl64_primary_transcript.txt 19 txcat_file = /RIS/home/verhaakgroup/PRADA/hg19broad/Ensembl64_primary_transcript.txt
20 20
21 --PBS-- 21 --PBS--
22 -M = szheng2@mdanderson.org 22 -M = szheng2@mdanderson.org
23 -q = long 23 -q = long
24 -l = nodes=1:ppn=i2,walltime=120:00:00 #nodes and ppn are required 24 -l = nodes=1:ppn=12,walltime=120:00:00 #nodes and ppn are required
25 25
26 --BWA aln-- 26 --BWA aln--
27 -t = 2 #This should be equal to the number of ppn 27 -t = 2 #This should be equal to the number of ppn
28 28
29 --BWA samse-- 29 --BWA samse--