diff pyPRADA_1.2/tools/bwa-0.5.7-mh/Makefile.am @ 0:acc2ca1a3ba4

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author siyuan
date Thu, 20 Feb 2014 00:44:58 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/pyPRADA_1.2/tools/bwa-0.5.7-mh/Makefile.am	Thu Feb 20 00:44:58 2014 -0500
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+## Makefile.am -- Process this file with automake to produce Makefile.in
+ACLOCAL_AMFLAGS=-I m4
+AM_CFLAGS = -Wall -m64 -fPIC
+bin_PROGRAMS = bwa
+noinst_LIBRARIES = libbwacore.a
+libbwacore_a_SOURCES = utils.c bwt.c bwtio.c bwtaln.c bwtgap.c bntseq.c \
+	stdaln.c bwaseqio.c bwase.c kstring.c cs2nt.c 
+bwa_SOURCES = is.c bwtmisc.c bwtindex.c simple_dp.c bwape.c \
+	bwtsw2_core.c bwtsw2_main.c bwtsw2_aux.c bwt_lite.c bwtsw2_chain.c \
+	main.c
+bwa_LDADD = bwt_gen/libbwtgen.a libbwacore.a
+man_MANS= bwa.1
+SUBDIRS= bwt_gen .