diff pyPRADA_1.2/tools/samtools-0.1.16/sam_header.h @ 0:acc2ca1a3ba4

Uploaded
author siyuan
date Thu, 20 Feb 2014 00:44:58 -0500
parents
children
line wrap: on
line diff
--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/pyPRADA_1.2/tools/samtools-0.1.16/sam_header.h	Thu Feb 20 00:44:58 2014 -0500
@@ -0,0 +1,24 @@
+#ifndef __SAM_HEADER_H__
+#define __SAM_HEADER_H__
+
+#ifdef __cplusplus
+extern "C" {
+#endif
+
+	void *sam_header_parse2(const char *headerText);
+	void *sam_header_merge(int n, const void **dicts);
+	void sam_header_free(void *header);
+	char *sam_header_write(const void *headerDict);   // returns a newly allocated string
+
+	char **sam_header2list(const void *_dict, char type[2], char key_tag[2], int *_n);
+
+	void *sam_header2tbl(const void *dict, char type[2], char key_tag[2], char value_tag[2]);
+	const char *sam_tbl_get(void *h, const char *key);
+	int sam_tbl_size(void *h);
+	void sam_tbl_destroy(void *h);
+
+#ifdef __cplusplus
+}
+#endif
+
+#endif