# HG changeset patch
# User spficklin
# Date 1574702228 18000
# Node ID b14e4bf568b0c5062741b3a69ab63e4ab6e31428
# Parent  d1a0b7ded7e37e64be4f015647a9d52a9e6df0a8
Uploaded

diff -r d1a0b7ded7e3 -r b14e4bf568b0 aurora_wgcna.Rmd
--- a/aurora_wgcna.Rmd	Fri Nov 22 19:45:51 2019 -0500
+++ b/aurora_wgcna.Rmd	Mon Nov 25 12:17:08 2019 -0500
@@ -336,8 +336,9 @@
 ```
 
 ```{r}
-output = cbind(colnames(gemt), module_labels)
-colnames(output) = c('Gene', 'Module')
+module_colors = sub('ME','', module_labels)
+output = cbind(colnames(gemt), module_labels, module_colors)
+colnames(output) = c('Gene', 'Module', 'Color')
 write.csv(output, file = opt$gene_module_file, quote=FALSE, row.names=FALSE)
 ```