Mercurial > repos > takakoron > snpeff_3_6c

diff snpEff_genomes.loc @ 0:0d895b0e0f15 draft

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planemo upload
author takakoron
date Mon, 11 Apr 2016 11:16:50 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/snpEff_genomes.loc	Mon Apr 11 11:16:50 2016 -0400
@@ -0,0 +1,21 @@
+# SnpEff databases
+# List created using command: java -jar snpEff.jar databases
+# Version    Description
+DNApod_RAPbuild5_representative 	 DNApod_Rice_IRGSP-RAP_build5_representative
+DNApod_RAPbuild5_predicted 	 DNApod_Rice_IRGSP-RAP_build5_predicted
+DNApod_maizeZmB73_5b_WGS	 DNApod_Maize_ZmB73_5b_working-set
+DNApod_maizeZmB73_5b_FGS	 DNApod_Maize_ZmB73_5b_filtered-set
+DNApod_Sorbi_Sbi1.4_JGI 	 DNApod_Sorbi_Sbi1.4_JGI
+alyrata1 	 Arabidopsis_lyrata   alyrata1
+alyrata107 	 Arabidopsis_lyrata   alyrata107
+v.1.0.21 	 Arabidopsis_lyrata   v.1.0.21
+athaliana130 	 Arabidopsis_Thaliana   athaliana130
+athalianaTair10 	 Arabidopsis_Thaliana   athalianaTair10
+athalianaTair9 	 Arabidopsis_Thaliana   athalianaTair9
+TAIR10.21 	 Arabidopsis_thaliana   TAIR10.21
+Oryza_brachyantha.v1.4b.21 	 Oryza_brachyantha   Oryza_brachyantha.v1.4b.21
+AGI1.1.21 	 Oryza_glaberrima   AGI1.1.21
+ASM465v1.21 	 Oryza_indica   ASM465v1.21
+IRGSP-1.0.21 	 Oryza_sativa   IRGSP-1.0.21
+Sorbi1.21 	 Sorghum_bicolor   Sorbi1.21
+AGPv3.21 	 Zea_mays   AGPv3.21