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1
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1 log_file=file("Read_Dataset.log", open = "wt")
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2 sink(log_file)
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3 sink(log_file, type = "out")
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4 suppressWarnings(suppressMessages(library("batch")))
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5 suppressWarnings(suppressMessages(library(data.table)))
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6 listArguments = parseCommandArgs(evaluate=FALSE)
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7 datasetsource = listArguments[["datasetsource"]]
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8
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9 training=fread(datasetsource,header = T)
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10 training1=fread(datasetsource,header = T)
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11 training=as.matrix(training)
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12 training=training[,-1]
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13 rownames(training)<-training1$V1
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14 training=t(training)
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15 training=training[,-c(4,7)]
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3
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16 tp=training[,4]
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17 tr=training[,5]
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18 tp[tp=="6HR"]<-0
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19 tp[tp=="24HR"]<-1
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20 tr[tr=="DHA"]<-0
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21 tr[tr=="UT"]<-1
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22 training[,4]=tp
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23 training[,5]=tr
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1
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24 fwrite(
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25 as.data.frame(training),"Format_Dream.tsv",sep="\t"
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26 )
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27
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28
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29
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30
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31
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32
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33
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34
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