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comparison test-data/BASIC_assembly_dataset/GFP.gb @ 0:3a3b0f7cb5c2 draft

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planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/DnaCauldron/tree/master commit 3401816c949b538bd9c67e61cbe92badff6a4007-dirty
author tduigou
date Wed, 11 Jun 2025 09:32:59 +0000
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comparison
equal deleted inserted replaced
-1:000000000000 0:3a3b0f7cb5c2
1 LOCUS GFP 3735 bp DNA circular UNK 01-JAN-1980
2 DEFINITION
3 ACCESSION
4 VERSION
5 SOURCE
6 ORGANISM
7 COMMENT Serial Cloner Genbank Format
8 COMMENT SerialCloner_Type=DNA
9 COMMENT SerialCloner_Comments=seq 20140514
10 COMMENT SerialCloner_Ends=0,0,,0,
11 FEATURES Location/Qualifiers
12 primer_bind 3668..3687
13 /label=T7
14 /SerialCloner_Color=&h008B8B
15 /SerialCloner_Show=True
16 /SerialCloner_Protect=False
17 /SerialCloner_Arrow=True
18 rep_origin complement(1534..2162)
19 /label=ColE1 origin
20 /SerialCloner_Color=&h4682B4
21 /SerialCloner_Show=True
22 /SerialCloner_Protect=False
23 /SerialCloner_Arrow=True
24 CDS complement(2314..2973)
25 /label=AmpR
26 /SerialCloner_Color=&h8FBC8F
27 /SerialCloner_Show=True
28 /SerialCloner_Protect=False
29 /SerialCloner_Arrow=True
30 Promoter complement(3213..3241)
31 /label=Amp prom
32 /SerialCloner_Color=&h4682B4
33 /SerialCloner_Show=True
34 /SerialCloner_Protect=False
35 /SerialCloner_Arrow=True
36 misc_feature 3668..3684
37 /label=T7-promoter
38 /SerialCloner_Color=&hFF00FF
39 /SerialCloner_Show=True
40 /SerialCloner_Protect=False
41 /SerialCloner_Arrow=True
42 misc_feature 19..732
43 /label=GFP-SF-pep
44 /SerialCloner_Color=&h80FF80
45 /SerialCloner_Show=True
46 /SerialCloner_Protect=False
47 /SerialCloner_Arrow=True
48 misc_feature 1..18
49 /label=Prefix
50 /SerialCloner_Color=&hFF0080
51 /SerialCloner_Show=True
52 /SerialCloner_Protect=False
53 /SerialCloner_Arrow=True
54 misc_feature 742..759
55 /label=Suffix
56 /SerialCloner_Color=&hFF00FF
57 /SerialCloner_Show=True
58 /SerialCloner_Protect=False
59 /SerialCloner_Arrow=True
60 misc_feature 2974..3170
61 /label=pB1a promoter
62 /SerialCloner_Color=&h84A4C0
63 /SerialCloner_Show=True
64 /SerialCloner_Protect=False
65 /SerialCloner_Arrow=True
66 ORIGIN
67 1 TCTGGTGGGT CTCTGTCCat gcgtaaaggc gaagaactgt tcacgggcgt agttccgatt
68 61 ctggtcgagc tggacggcga tgtgaacggt cataagttta gcgttcgcgg tgaaggtgag
69 121 ggcgacgcga ccaacggcaa actgaccctg aagttcatct gcaccaccgg taaactgccg
70 181 gtgccttggc cgaccttggt gacgacgttg acgtatggcg tgcagtgttt tgcgcgttat
71 241 ccggaccaca tgaaacaaca cgatttcttc aaatctgcga tgccggaggg ttacgtccag
72 301 gagcgtacca tttccttcaa ggatgatggc acttacaaaa ctcgcgcaga ggttaagttt
73 361 gaaggtgaca cgctggtcaa tcgtatcgaa ttgaagggta tcgactttaa agaggatggt
74 421 aacattctgg gccataaact ggagtataac ttcaacagcc ataatgttta cattacggca
75 481 gacaagcaaa agaacggcat caaggccaat ttcaagattc gccacaatgt tgaggacggt
76 541 agcgtccaac tggccgacca ttaccagcag aacaccccaa ttggtgacgg tccggttttg
77 601 ctgccggata atcactatct gagcacccaa agcgtgctga gcaaagatcc gaacgaaaaa
78 661 cgtgatcaca tggtcctgct ggaatttgtg accgctgcgg gcatcaccca cggtatggac
79 721 gagctgtata agcgtccgta aGGCTCGGGA GACCTATCGT ATCTTTCTAG AAGATCTCCT
80 781 ACAATATTCT CAGCTGCCAT GGAAAATCGA TGTTCTTCTT TTATTCTCTC AAGATTTTCA
81 841 GGCTGTATAT TAAAACTTAT ATTAAGAACT ATGCTAACCA CCTCATCAGG AACCGTTGTA
82 901 GGTGGCGTGG GTTTTCTTGG CAATCGACTC TCATGAAAAC TACGAGCTAA ATATTCAATA
83 961 TGTTCCTCTT GACCAACTTT ATTCTGCATT TTTTTTGAAC GAGGTTTAGA GCAAGCTTCA
84 1021 GGAAACTGAG ACAGGAATTT TATTAAAAAT TTAAATTTTG AAGAAAGTTC AGGGTTAATA
85 1081 GCATCCATTT TTTGCTTTGC AAGTTCCTCA GCATTCTTAA CAAAAGACGT CTCTTTTGAC
86 1141 ATGTTTAAAG TTTAAACCTC CTGTGTGAAA TTaTTATCCG CTCAtAATTC CACACATTAT
87 1201 ACGAGCCGGA AGCATAAAGT GTAAAGCCTG GGGTGCCTAA TGAGTGAGCT AACTCACATT
88 1261 AATTGCGTTG CGCTCACTGC CAATTGCTTT CCAGTCGGGA AACCTGTCGT GCCAGCTGCA
89 1321 TTAATGAATC GGCCAACGCG CGGGGAGAGG CGGTTTGCGT ATTGGGCGCT CTTCCGCTTC
90 1381 CTCGCTCACT GACTCGCTGC GCTCGGTCGT TCGGCTGCGG CGAGCGGTAT CAGCTCACTC
91 1441 AAAGGCGGTA ATACGGTTAT CCACAGAATC AGGGGATAAC GCAGGAAAGA ACATGTGAGC
92 1501 AAAAGGCCAG CAAAAGGCCA GGAACCGTAA AAAGGCCGCG TTGCTGGCGT TTTTCCATAG
93 1561 GCTCCGCCCC CCTGACGAGC ATCACAAAAA TCGACGCTCA AGTCAGAGGT GGCGAAACCC
94 1621 GACAGGACTA TAAAGATACC AGGCGTTTCC CCCTGGAAGC TCCCTCGTGC GCTCTCCTGT
95 1681 TCCGACCCTG CCGCTTACCG GATACCTGTC CGCCTTTCTC CCTTCGGGAA GCGTGGCGCT
96 1741 TTCTCATAGC TCACGCTGTA GGTATCTCAG TTCGGTGTAG GTCGTTCGCT CCAAGCTGGG
97 1801 CTGTGTGCAC GAACCCCCCG TTCAGCCCGA CCGCTGCGCC TTATCCGGTA ACTATCGTCT
98 1861 TGAGTCCAAC CCGGTAAGAC ACGACTTATC GCCACTGGCA GCAGCCACTG GTAACAGGAT
99 1921 TAGCAGAGCG AGGTATGTAG GCGGTGCTAC AGAGTTCTTG AAGTGGTGGC CTAACTACGG
100 1981 CTACACTAGA AGGACAGTAT TTGGTATCTG CGCTCTGCTG AAGCCAGTTA CCTTCGGAAA
101 2041 AAGAGTTGGT AGCTCTTGAT CCGGCAAACA AACCACCGCT GGTAGCGGTG GTTTTTTTGT
102 2101 TTGCAAGCAG CAGATTACGC GCAGAAAAAA AGGATCTCAA GAAGATCCTT TGATCTTTTC
103 2161 TACGGGGTCT GACGCTCAGT GGAACGAAAA CTCACGTTAA GGGATTTTGG TCATGAGATT
104 2221 ATCAAAAAGG ATCTTCACCT AGATCCTTTT AAATTAAAAA TGAAGTTTTA AATCAATCTA
105 2281 AAGTATATAT GAGTAAACTT GGTCTGACAG TTACCAATGC TTAATCAGTG AGGCACCTAT
106 2341 CTCAGCGATC TGTCTATTTC GTTCATCCAT AGTTGCCTGA CTCCCCGTCG TGTAGATAAC
107 2401 TACGATACGG GAGGGCTTAC CATCTGGCCC CAGTGCTGCA ATGATACCGC GAGACCCACG
108 2461 CTCACCGGCT CCAGATTTAT CAGCAATAAA CCAGCCAGCC GGAAGGGCCG AGCGCAGAAG
109 2521 TGGTCCTGCA ACTTTATCCG CCTCCATCCA GTCTATTAAT TGTTGCCGGG AAGCTAGAGT
110 2581 AAGTAGTTCG CCAGTTAATA GTTTGCGCAA CGTTGTTGCC ATTGCTACAG GCATCGTGGT
111 2641 GTCACGCTCG TCGTTTGGTA TGGCTTCATT CAGCTCCGGT TCCCAACGAT CAAGGCGAGT
112 2701 TACATGATCC CCCATGTTGT GCAAAAAAGC GGTTAGCTCC TTCGGTCCTC CGATCGTTGT
113 2761 CAGAAGTAAG TTGGCCGCAG TGTTATCACT CATGGTTATG GCAGCACTGC ATAATTCTCT
114 2821 TACTGTCATG CCATCCGTAA GATGCTTTTC TGTGACTGGT GAGTACTCAA CCAAGTCATT
115 2881 CTGAGAATAG TGTATGCGGC GACCGAGTTG CTCTTGCCCG GCGTCAATAC GGGATAATAC
116 2941 CGCGCCACAT AGCAGAACTT TAAAAGTGCT CATCATTGGA AAACGTTCTT CGGGGCGAAA
117 3001 ACTCTCAAGG ATCTTACCGC TGTTGAGATC CAGTTCGATG TAACCCACTC GTGCACCCAA
118 3061 CTGATCTTCA GCATCTTTTA CTTTCACCAG CGTTTCTGGG TGAGCAAAAA CAGGAAGGCA
119 3121 AAATGCCGCA AAAAAGGGAA TAAGGGCGAC ACGGAAATGT TGAATACTCA TACTCTTCCT
120 3181 TTTTCAATAT TATTGAAGCA TTTATCAGGG TTATTGTCTC ATGAGCGGAT ACATATTTGA
121 3241 ATGTATTTAG AAAAATAAAC AAATAGGGGT TCCGCGCACA TTTCCCCGAA AAGTGCCACC
122 3301 TGACGTCTAA GAAACCATTA TTATCATGAC ATTAACCTAT AAAAATAGGC GTATCACGAG
123 3361 GCCGCCCCTG CAGCCGAATT ATATTATTTT TGCCAAATAA TTTTTAACAA AAGCTCTGAA
124 3421 GTCTTCTTCA TTTAAATTCT TAGATGATAC TTCATCTGGA AAATTGTCCC AATTAGTAGC
125 3481 ATCACGCTGT GAGTAAGTTC TAAACCATTT TTTTATTGTT GTATTATCTC TAATCTTACT
126 3541 ACTCGATGAG TTTTCGGTAT TATCTCTATT TTTAACTTGG AGCAGGTTCC ATTCATTGTT
127 3601 TTTTTCATCA TAGTGAATAA AATCAACTGC TTTAACACTT GTGCCTGAAC ACCATATCCA
128 3661 TCCGGCGTAA TACGACTCAC TATAGGGAGA GCGGCCGCCA GATCTTCCGG ATGGCTCGAG
129 3721 TTTTTCAGCA AGATA
130 //