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planemo upload for repository https://github.com/Edinburgh-Genome-Foundry/Plateo commit cc895a281863630e391c310322fbddfd31ac1f8f-dirty
| author | tduigou |
|---|---|
| date | Thu, 16 Oct 2025 14:27:06 +0000 |
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LOCUS . 2532 bp DNA UNK 01-JAN-1980 DEFINITION . ACCESSION <unknown id> VERSION <unknown id> KEYWORDS . SOURCE . ORGANISM . . FEATURES Location/Qualifiers terminator 392..419 /note="T7Te terminator" /note="phage T7 early transcription terminator" rep_origin complement(431..1018) /direction=LEFT /note="ori" /note="high-copy-number ColE1/pMB1/pBR322/pUC origin of replication" terminator 1040..1069 /note="T3Te terminator" /note="phage T3 early transcription terminator" misc_feature 1143..1148 /note="BsmBI" source 5..1149 /source="Exported" misc_feature 1154..1164 /note="KozaK" CDS 1162..1164 /codon_start=1 /note="ATG" /translation="M" CDS 1165..1872 /codon_start=1 /note="mRuby2" /product="monomeric red fluorescent protein derived from mRuby, with improved photophysical properties (Lam et al., 2012)" /translation="VSKGEELIKENMRMKVVMEGSVNGHQFKCTGEGEGNPYMGTQTMR IKVIEGGPLPFAFDILATSFMYGSRTFIKYPKGIPDFFKQSFPEGFTWERVTRYEDGGV VTVMQDTSLEDGCLVYHVQVRGVNFPSNGPVMQKKTKGWEPNTEMMYPADGGLRGYTHM ALKVDGGGHLSCSFVTTYRSKKTVGNIKMPGIHAVDHRLERLEESDNEMFVVQREHAVA KFAGLGGGMDELYK" source 1154..1872 /source="Exported" misc_feature complement(1878..1883) /note="BsmBI" terminator 1950..1981 /note="tonB terminator" /note="bidirectional E. coli tonB-P14 transcription terminator" promoter 1982..2084 /note="cat promoter" /note="promoter of the E. coli cat gene" source 1877..2532 /source="Exported" ORIGIN 1 ctcaggcgca atcacgaatg aataacggtt tggttggtgc gagtgatttt gatgacgagc 61 gtaatggctg gcctgttgaa caagtctgga aagaaatgca taagcttttg ccattctcac 121 cggattcagt cgtcactcat ggtgatttct cacttgataa ccttattttt gacgagggga 181 aattaatagg ttgtattgat gttggacgag tcggaatcgc agaccgatac caggatcttg 241 ccatcctatg gaactgcctc ggtgagtttt ctccttcatt acagaaacgg ctttttcaaa 301 aatatggtat tgataatcct gatatgaata aattgcagtt tcacttgatg ctcgatgagt 361 ttttctaatg agggcccaaa tgtaatcacc tggctcacct tcgggtgggc ctttctgcgt 421 tgctggcgtt tttccatagg ctccgccccc ctgacgagca tcacaaaaat cgatgctcaa 481 gtcagaggtg gcgaaacccg acaggactat aaagatacca ggcgtttccc cctggaagct 541 ccctcgtgcg ctctcctgtt ccgaccctgc cgcttaccgg atacctgtcc gcctttctcc 601 cttcgggaag cgtggcgctt tctcatagct cacgctgtag gtatctcagt tcggtgtagg 661 tcgttcgctc caagctgggc tgtgtgcacg aaccccccgt tcagcccgac cgctgcgcct 721 tatccggtaa ctatcgtctt gagtccaacc cggtaagaca cgacttatcg ccactggcag 781 cagccactgg taacaggatt agcagagcga ggtatgtagg cggtgctaca gagttcttga 841 agtggtggcc taactacggc tacactagaa gaacagtatt tggtatctgc gctctgctga 901 agccagttac ctcggaaaaa gagttggtag ctcttgatcc ggcaaacaaa ccaccgctgg 961 tagcggtggt ttttttgttt gcaagcagca gattacgcgc agaaaaaaag gatctcaaga 1021 agatcctttg attttctacc gaagaaaggc ccacccgtga aggtgagcca gtgagttgat 1081 tgcagtccag ttacgctgga gtctgaggct cgtcctgaat gatatcaagc ttgaattcgt 1141 tacgtctcgg tgcccgccac catggtgtct aagggcgaag agctgatcaa ggaaaatatg 1201 cgtatgaagg tggtcatgga aggttcggtc aacggccacc aattcaaatg cacaggtgaa 1261 ggagaaggca atccgtacat gggaactcaa accatgagga tcaaagtcat cgagggagga 1321 cccctgccat ttgcctttga cattcttgcc acgtcgttca tgtatggcag ccgtactttt 1381 atcaagtacc cgaaaggcat tcctgatttc tttaaacagt cctttcctga gggttttact 1441 tgggaaagag ttacgagata cgaagatggt ggagtcgtca ccgtcatgca ggacaccagc 1501 cttgaggatg gctgtctcgt ttaccacgtc caagtcagag gggtaaactt tccctccaat 1561 ggtcccgtga tgcagaagaa gaccaagggt tgggagccta atacagagat gatgtatcca 1621 gcagatggtg gtctgagggg atacactcat atggcactga aagttgatgg tggtggccat 1681 ctgtcttgct ctttcgtaac aacttacagg tcaaaaaaga ccgtcgggaa catcaagatg 1741 cccggtatcc atgccgttga tcaccgcctg gaaaggttag aggaaagtga caatgaaatg 1801 ttcgtagtac aacgcgaaca cgcagttgcc aagttcgccg ggcttggtgg tgggatggac 1861 gagctgtaca agagcgcgag acgaagacga attctctaga tatcgctcaa tactgaccat 1921 ttaaatcata cctgacctcc atagcagaaa gtcaaaagcc tccgaccgga ggcttttgac 1981 ttgatcggca cgtaagaggt tccaactttc accataatga aataagatca ctaccgggcg 2041 tattttttga gttatcgaga ttttcaggag ctaaggaagc taaaatgagc catattcaac 2101 gggaaacgtc ttgctcgagg ccgcgattaa attccaacat ggatgctgat ttatatgggt 2161 ataaatgggc tcgcgataat gtcgggcaat caggtgcgac aatctatcga ttgtatggga 2221 agcccgatgc gccagagttg tttctgaaac atggcaaagg tagcgttgcc aatgatgtta 2281 cagatgagat ggtcaggcta aactggctga cggaatttat gcctcttccg accatcaagc 2341 attttatccg tactcctgat gatgcatggt tactcaccac tgcgatccca gggaaaacag 2401 cattccaggt attagaagaa tatcctgatt caggtgaaaa tattgttgat gcgctggcag 2461 tgttcctgcg ccggttgcat tcgattcctg tttgtaattg tccttttaac ggcgatcgcg 2521 tatttcgtct cg //
