Mercurial > repos > tduigou > inchi_to_sink

comparison inchi_to_sink.xml @ 3:47f49582d8db draft

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planemo upload for repository https://github.com/brsynth/synbiocad-galaxy-wrappers commit 2e8aa2e7c0581c7eed2074d15f7e4317ecde2ad6
author tduigou
date Mon, 01 May 2023 01:27:27 +0000
parents 3627d3e49889
children
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2:3627d3e49889 3:47f49582d8db
1 <tool id="inchi_to_sink" name="Inchi to sink" version="@TOOL_VERSION@" profile="19.09"> 1 <tool id="inchi_to_sink" name="Inchi to sink" version="@TOOL_VERSION@" profile="19.09" license="MIT">
2 <description>Convert InChI input to CSV sink</description> 2 <description>Convert InChI input to CSV sink</description>
3 <macros> 3 <macros>
4 <token name="@TOOL_VERSION@">1.0.0</token> 4 <token name="@TOOL_VERSION@">1.0.1</token>
5 </macros> 5 </macros>
6 <requirements>
7 <requirement type="package" version="0.5">echo</requirement>
8 </requirements>
9 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
10 #set inchi=$source_inchi.rstrip() 7 #set inchi=$source_inchi.rstrip()
11 echo -e '"name","inchi"\n"$source_name","$inchi"' > '$sink' 8 echo -e '"name","inchi"\n"$source_name","$inchi"' > '$sink'
12 ]]></command> 9 ]]></command>
13 <inputs> 10 <inputs>
43 * **source_inchi**\ : (string) Inchi string 40 * **source_inchi**\ : (string) Inchi string
44 41
45 Optional: 42 Optional:
46 43
47 * **source_name**\ : (string) Inchi name (Default=Biosensor) 44 * **source_name**\ : (string) Inchi name (Default=Biosensor)
48
49
50 Version
51 ----------
52
53 1.0.0
54
55 Authors
56 -------
57
58 * **Kenza BAZI KABBAJ**
59
60 ]]></help> 45 ]]></help>
46 <creator>
47 <organization name="BioRetroSynth" url="https://github.com/brsynth"/>
48 </creator>
49 <citations>
50 <citation type="bibtex">
51 @unpublished{inchi_to_sink
52 title = {{inchi_to_sink}},
53 url = {https://github.com/brsynth/},
54 }
55 </citation>
56 </citations>
61 </tool> 57 </tool>