Mercurial > repos > tduigou > rpcompletion
comparison test-data/rp_003_0001.xml @ 1:b8242cf18cc0 draft
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
author | tduigou |
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date | Wed, 09 Feb 2022 16:05:48 +0000 |
parents | 98d925a75257 |
children | e8d56cb2be03 |
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0:98d925a75257 | 1:b8242cf18cc0 |
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21 </rdf:RDF> | 21 </rdf:RDF> |
22 </annotation> | 22 </annotation> |
23 </compartment> | 23 </compartment> |
24 </listOfCompartments> | 24 </listOfCompartments> |
25 <listOfSpecies> | 25 <listOfSpecies> |
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27 <annotation> | |
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35 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
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37 <brsynth:inchi value="InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)"/> | |
38 <brsynth:inchikey value="XPPKVPWEQAFLFU-UHFFFAOYSA-N"/> | |
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48 <bqbiol:is> | |
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53 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
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55 <brsynth:inchi/> | |
56 <brsynth:inchikey/> | |
57 </brsynth:brsynth> | |
58 </rdf:BRSynth> | |
59 </rdf:RDF> | |
60 </annotation> | |
61 </species> | |
62 <species metaid="_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39" id="MNXM24" name="MNXM24" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
63 <annotation> | |
64 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
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71 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
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81 <annotation> | |
82 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
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91 <brsynth:inchi value="InChI=1S/C40H56/c1-33(2)19-13-23-37(7)27-17-31-39(9)29-15-25-35(5)21-11-12-22-36(6)26-16-30-40(10)32-18-28-38(8)24-14-20-34(3)4/h11-12,15-22,25-32H,13-14,23-24H2,1-10H3"/> | |
92 <brsynth:inchikey value="OAIJSZIZWZSQBC-UHFFFAOYSA-N"/> | |
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99 <annotation> | |
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102 <bqbiol:is> | |
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107 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
108 <brsynth:smiles value="[H]C(=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]"/> | |
109 <brsynth:inchi value="InChI=1S/C40H64/c1-33(2)19-13-23-37(7)27-17-31-39(9)29-15-25-35(5)21-11-12-22-36(6)26-16-30-40(10)32-18-28-38(8)24-14-20-34(3)4/h11-12,19-22,27-30H,13-18,23-26,31-32H2,1-10H3"/> | |
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117 <annotation> | |
118 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
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28 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 136 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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45 <annotation> | |
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81 <annotation> | |
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120 <bqbiol:is> | |
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125 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
126 <brsynth:smiles value="O=P(O)(O)OP(=O)(O)O"/> | |
127 <brsynth:inchi value="InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)"/> | |
128 <brsynth:inchikey value="XPPKVPWEQAFLFU-UHFFFAOYSA-N"/> | |
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132 </annotation> | |
133 </species> | |
134 <species metaid="b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46" id="CMPD_0000000001" name="CMPD_0000000001" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
135 <annotation> | |
136 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
137 <rdf:Description rdf:about="#b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46"> | |
138 <bqbiol:is> | |
139 <rdf:Bag/> | |
140 </bqbiol:is> | |
141 </rdf:Description> | |
142 <rdf:BRSynth rdf:about="#b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46"> | |
143 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
144 <brsynth:smiles value="[H]C(=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]"/> | |
145 <brsynth:inchi value="InChI=1S/C40H64/c1-33(2)19-13-23-37(7)27-17-31-39(9)29-15-25-35(5)21-11-12-22-36(6)26-16-30-40(10)32-18-28-38(8)24-14-20-34(3)4/h11-12,19-22,27-30H,13-18,23-26,31-32H2,1-10H3"/> | |
146 <brsynth:inchikey value="YVLPJIGOMTXXLP-UHFFFAOYSA-N"/> | |
147 </brsynth:brsynth> | |
148 </rdf:BRSynth> | |
149 </rdf:RDF> | |
150 </annotation> | |
151 </species> | |
152 <species metaid="_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39" id="MNXM24" name="MNXM24" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> | |
153 <annotation> | |
154 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | |
155 <rdf:Description rdf:about="#_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39"> | |
156 <bqbiol:is> | |
157 <rdf:Bag/> | |
158 </bqbiol:is> | |
159 </rdf:Description> | |
160 <rdf:BRSynth rdf:about="#_61841f05183ff06dbe77a0e01f6d73d7a890997d823ac18d9fd56bac3d4bcc39"> | |
161 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> | |
162 <brsynth:smiles/> | |
163 <brsynth:inchi/> | |
164 <brsynth:inchikey/> | |
165 </brsynth:brsynth> | 165 </brsynth:brsynth> |
166 </rdf:BRSynth> | 166 </rdf:BRSynth> |
167 </rdf:RDF> | 167 </rdf:RDF> |
168 </annotation> | 168 </annotation> |
169 </species> | 169 </species> |
349 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> | 349 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
350 </rdf:BRSynth> | 350 </rdf:BRSynth> |
351 </rdf:RDF> | 351 </rdf:RDF> |
352 </annotation> | 352 </annotation> |
353 <groups:listOfMembers> | 353 <groups:listOfMembers> |
354 <groups:member groups:idRef="CMPD_0000000003"/> | |
354 <groups:member groups:idRef="CMPD_0000000001"/> | 355 <groups:member groups:idRef="CMPD_0000000001"/> |
355 <groups:member groups:idRef="CMPD_0000000003"/> | |
356 </groups:listOfMembers> | 356 </groups:listOfMembers> |
357 </groups:group> | 357 </groups:group> |
358 <groups:group metaid="_564fce39b23c6cf87d12dc2c612448384fd2cd980fe3fc07829e2ef802645579" groups:id="rp_trunk_species" groups:kind="collection"> | 358 <groups:group metaid="_564fce39b23c6cf87d12dc2c612448384fd2cd980fe3fc07829e2ef802645579" groups:id="rp_trunk_species" groups:kind="collection"> |
359 <annotation> | 359 <annotation> |
360 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 360 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
362 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> | 362 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
363 </rdf:BRSynth> | 363 </rdf:BRSynth> |
364 </rdf:RDF> | 364 </rdf:RDF> |
365 </annotation> | 365 </annotation> |
366 <groups:listOfMembers> | 366 <groups:listOfMembers> |
367 <groups:member groups:idRef="TARGET_0000000001"/> | |
368 <groups:member groups:idRef="CMPD_0000000001"/> | |
369 <groups:member groups:idRef="MNXM83"/> | |
367 <groups:member groups:idRef="CMPD_0000000003"/> | 370 <groups:member groups:idRef="CMPD_0000000003"/> |
368 <groups:member groups:idRef="MNXM83"/> | |
369 <groups:member groups:idRef="TARGET_0000000001"/> | |
370 <groups:member groups:idRef="MNXM34"/> | 371 <groups:member groups:idRef="MNXM34"/> |
371 <groups:member groups:idRef="CMPD_0000000001"/> | |
372 </groups:listOfMembers> | 372 </groups:listOfMembers> |
373 </groups:group> | 373 </groups:group> |
374 <groups:group metaid="_9e3154173c97366b3980dd1642e1e35d0bdfc3274abc744e89ecb518bcd48378" groups:id="rp_completed_species" groups:kind="collection"> | 374 <groups:group metaid="_9e3154173c97366b3980dd1642e1e35d0bdfc3274abc744e89ecb518bcd48378" groups:id="rp_completed_species" groups:kind="collection"> |
375 <annotation> | 375 <annotation> |
376 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> | 376 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
378 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> | 378 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
379 </rdf:BRSynth> | 379 </rdf:BRSynth> |
380 </rdf:RDF> | 380 </rdf:RDF> |
381 </annotation> | 381 </annotation> |
382 <groups:listOfMembers> | 382 <groups:listOfMembers> |
383 <groups:member groups:idRef="MNXM11"/> | |
383 <groups:member groups:idRef="MNXM8975"/> | 384 <groups:member groups:idRef="MNXM8975"/> |
384 <groups:member groups:idRef="MNXM11"/> | |
385 <groups:member groups:idRef="MNXM24"/> | 385 <groups:member groups:idRef="MNXM24"/> |
386 </groups:listOfMembers> | 386 </groups:listOfMembers> |
387 </groups:group> | 387 </groups:group> |
388 <groups:group metaid="_58b3b59284e0d918d6d3f3bcadc2d757726da7594cd899cad4e745836ac967a3" groups:id="rp_sink_species" groups:kind="collection"> | 388 <groups:group metaid="_58b3b59284e0d918d6d3f3bcadc2d757726da7594cd899cad4e745836ac967a3" groups:id="rp_sink_species" groups:kind="collection"> |
389 <annotation> | 389 <annotation> |
392 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> | 392 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
393 </rdf:BRSynth> | 393 </rdf:BRSynth> |
394 </rdf:RDF> | 394 </rdf:RDF> |
395 </annotation> | 395 </annotation> |
396 <groups:listOfMembers> | 396 <groups:listOfMembers> |
397 <groups:member groups:idRef="MNXM34"/> | |
398 <groups:member groups:idRef="MNXM11"/> | 397 <groups:member groups:idRef="MNXM11"/> |
399 <groups:member groups:idRef="MNXM83"/> | 398 <groups:member groups:idRef="MNXM83"/> |
399 <groups:member groups:idRef="MNXM34"/> | |
400 </groups:listOfMembers> | 400 </groups:listOfMembers> |
401 </groups:group> | 401 </groups:group> |
402 </groups:listOfGroups> | 402 </groups:listOfGroups> |
403 </model> | 403 </model> |
404 </sbml> | 404 </sbml> |