Mercurial > repos > tduigou > rpranker
annotate test-data/rp_003_0131.xml @ 4:0b6c315489e4 draft default tip
planemo upload commit 3bc34bfc82850daa2229724c396dcd9454039273-dirty
author | tduigou |
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date | Fri, 18 Nov 2022 16:04:21 +0000 |
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1 <?xml version="1.0" encoding="UTF-8"?> |
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2 <sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" level="3" version="1" groups:required="false" fbc:required="false"> |
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3 <model metaid="d5d4a5735e41ff2b063def8c757236e2e1a0f63c1dfee8baf1e79e81ce759172" id="RP_model_003_0131" name="003_0131" substanceUnits="mole" timeUnits="second" extentUnits="mole" fbc:strict="true"> |
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4 <listOfCompartments> |
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5 <compartment metaid="_2e7d2c03a9507ae265ecf5b5356885a53393a2029d241394997265a1a25aefc6" sboTerm="SBO:0000290" id="c" name="cytosol" size="1" constant="true"> |
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6 <annotation> |
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7 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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8 <rdf:Description rdf:about="#_2e7d2c03a9507ae265ecf5b5356885a53393a2029d241394997265a1a25aefc6"> |
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9 <bqbiol:is> |
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10 <rdf:Bag> |
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11 <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c"/> |
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12 <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c_c"/> |
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13 <rdf:li rdf:resource="http://identifiers.org/metanetx.compartment/MNXC3"/> |
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14 <rdf:li rdf:resource="http://identifiers.org/seed/c"/> |
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15 <rdf:li rdf:resource="http://identifiers.org/seed/c0"/> |
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16 <rdf:li rdf:resource="http://identifiers.org/seed/cytosol"/> |
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17 <rdf:li rdf:resource="http://identifiers.org/name/cytosol"/> |
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18 </rdf:Bag> |
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19 </bqbiol:is> |
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20 </rdf:Description> |
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21 </rdf:RDF> |
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22 </annotation> |
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23 </compartment> |
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24 </listOfCompartments> |
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25 <listOfSpecies> |
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26 <species metaid="_2f4b2d21d00b43a266620e821de533b08c3e42ff09ca008f915ca4400eb7d8c4" id="MNXM8975" name="MNXM8975" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
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27 <annotation> |
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28 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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29 <rdf:Description rdf:about="#_2f4b2d21d00b43a266620e821de533b08c3e42ff09ca008f915ca4400eb7d8c4"> |
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30 <bqbiol:is> |
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31 <rdf:Bag/> |
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32 </bqbiol:is> |
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33 </rdf:Description> |
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34 <rdf:BRSynth rdf:about="#_2f4b2d21d00b43a266620e821de533b08c3e42ff09ca008f915ca4400eb7d8c4"> |
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35 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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36 <brsynth:smiles/> |
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37 <brsynth:inchi/> |
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38 <brsynth:inchikey/> |
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39 <brsynth:fba_biomass_shadow_price> |
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40 <brsynth:value value="None"/> |
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41 </brsynth:fba_biomass_shadow_price> |
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42 <brsynth:fba_fraction_shadow_price> |
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43 <brsynth:value value="None"/> |
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44 </brsynth:fba_fraction_shadow_price> |
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45 <brsynth:thermo_standard_dg_formation> |
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46 <brsynth:value value="-2261.3806478863044"/> |
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47 <brsynth:units value="kilojoule / mole"/> |
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48 </brsynth:thermo_standard_dg_formation> |
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49 </brsynth:brsynth> |
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50 </rdf:BRSynth> |
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51 </rdf:RDF> |
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52 </annotation> |
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53 </species> |
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54 <species metaid="_2c27bb432be6149f648dcec0e702fd9bdf6449fb9f730bd86eeb0b63b93d8858" id="CMPD_0000000003" name="CMPD_0000000003" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
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55 <annotation> |
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56 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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57 <rdf:Description rdf:about="#_2c27bb432be6149f648dcec0e702fd9bdf6449fb9f730bd86eeb0b63b93d8858"> |
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58 <bqbiol:is> |
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59 <rdf:Bag/> |
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60 </bqbiol:is> |
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61 </rdf:Description> |
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62 <rdf:BRSynth rdf:about="#_2c27bb432be6149f648dcec0e702fd9bdf6449fb9f730bd86eeb0b63b93d8858"> |
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63 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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64 <brsynth:smiles value="[H]OP(=O)(O[H])OP(=O)(O[H])OC([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]"/> |
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65 <brsynth:inchi value="InChI=1S/C20H36O7P2/c1-17(2)9-6-10-18(3)11-7-12-19(4)13-8-14-20(5)15-16-26-29(24,25)27-28(21,22)23/h9,11,13,15H,6-8,10,12,14,16H2,1-5H3,(H,24,25)(H2,21,22,23)"/> |
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66 <brsynth:inchikey value="OINNEUNVOZHBOX-UHFFFAOYSA-N"/> |
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67 <brsynth:fba_biomass_shadow_price> |
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68 <brsynth:value value="-0.46362660495034685"/> |
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69 </brsynth:fba_biomass_shadow_price> |
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70 <brsynth:fba_fraction_shadow_price> |
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71 <brsynth:value value="-0.9959432048681541"/> |
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72 </brsynth:fba_fraction_shadow_price> |
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73 <brsynth:thermo_standard_dg_formation> |
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74 <brsynth:value value="-1495.8281099920857"/> |
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75 <brsynth:units value="kilojoule / mole"/> |
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76 </brsynth:thermo_standard_dg_formation> |
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77 </brsynth:brsynth> |
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78 </rdf:BRSynth> |
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79 </rdf:RDF> |
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80 </annotation> |
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81 </species> |
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82 <species metaid="_10a025d408ecc91b5894e1d66d8a31d96e4ac530a63de61f99720be74086a29f" id="MNXM34" name="MNXM34" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
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83 <annotation> |
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84 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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85 <rdf:Description rdf:about="#_10a025d408ecc91b5894e1d66d8a31d96e4ac530a63de61f99720be74086a29f"> |
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86 <bqbiol:is> |
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87 <rdf:Bag/> |
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88 </bqbiol:is> |
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89 </rdf:Description> |
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90 <rdf:BRSynth rdf:about="#_10a025d408ecc91b5894e1d66d8a31d96e4ac530a63de61f99720be74086a29f"> |
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91 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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92 <brsynth:smiles value="[H]OP(=O)(O[H])OP(=O)(O[H])OC([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]"/> |
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93 <brsynth:inchi value="InChI=1S/C15H28O7P2/c1-13(2)7-5-8-14(3)9-6-10-15(4)11-12-21-24(19,20)22-23(16,17)18/h7,9,11H,5-6,8,10,12H2,1-4H3,(H,19,20)(H2,16,17,18)"/> |
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94 <brsynth:inchikey value="VWFJDQUYCIWHTN-UHFFFAOYSA-N"/> |
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95 <brsynth:fba_biomass_shadow_price> |
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96 <brsynth:value value="None"/> |
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97 </brsynth:fba_biomass_shadow_price> |
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98 <brsynth:fba_fraction_shadow_price> |
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99 <brsynth:value value="None"/> |
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100 </brsynth:fba_fraction_shadow_price> |
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101 <brsynth:thermo_standard_dg_formation> |
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102 <brsynth:value value="-1607.8991259717538"/> |
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103 <brsynth:units value="kilojoule / mole"/> |
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104 </brsynth:thermo_standard_dg_formation> |
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105 </brsynth:brsynth> |
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106 </rdf:BRSynth> |
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107 </rdf:RDF> |
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108 </annotation> |
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109 </species> |
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110 <species metaid="_6817bb5f7133f50744b232330f1f3009343f785b8f77602ce5f44cdd9458f002" id="TARGET_0000000001" name="TARGET_0000000001" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
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111 <annotation> |
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112 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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113 <rdf:Description rdf:about="#_6817bb5f7133f50744b232330f1f3009343f785b8f77602ce5f44cdd9458f002"> |
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114 <bqbiol:is> |
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115 <rdf:Bag/> |
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116 </bqbiol:is> |
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117 </rdf:Description> |
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118 <rdf:BRSynth rdf:about="#_6817bb5f7133f50744b232330f1f3009343f785b8f77602ce5f44cdd9458f002"> |
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119 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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120 <brsynth:smiles value="[H]C(=C([H])C([H])=C(C([H])=C([H])C([H])=C(C([H])=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])=C(C([H])=C([H])C([H])=C(C([H])=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H]"/> |
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121 <brsynth:inchi value="InChI=1S/C40H56/c1-33(2)19-13-23-37(7)27-17-31-39(9)29-15-25-35(5)21-11-12-22-36(6)26-16-30-40(10)32-18-28-38(8)24-14-20-34(3)4/h11-12,15-22,25-32H,13-14,23-24H2,1-10H3"/> |
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122 <brsynth:inchikey value="OAIJSZIZWZSQBC-UHFFFAOYSA-N"/> |
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123 <brsynth:fba_biomass_shadow_price> |
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124 <brsynth:value value="-0.46174576679638996"/> |
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125 </brsynth:fba_biomass_shadow_price> |
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126 <brsynth:fba_fraction_shadow_price> |
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127 <brsynth:value value="-1.0"/> |
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128 </brsynth:fba_fraction_shadow_price> |
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129 <brsynth:thermo_standard_dg_formation> |
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130 <brsynth:value value="1245.5794452419402"/> |
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131 <brsynth:units value="kilojoule / mole"/> |
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132 </brsynth:thermo_standard_dg_formation> |
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133 </brsynth:brsynth> |
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134 </rdf:BRSynth> |
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135 </rdf:RDF> |
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136 </annotation> |
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137 </species> |
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138 <species metaid="_04b973bebf0de87c9fe23384ce8fd1fef71a33cbb0b827ade48cd364bf14a23a" id="MNXM36" name="MNXM36" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
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139 <annotation> |
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140 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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141 <rdf:Description rdf:about="#_04b973bebf0de87c9fe23384ce8fd1fef71a33cbb0b827ade48cd364bf14a23a"> |
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142 <bqbiol:is> |
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143 <rdf:Bag/> |
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144 </bqbiol:is> |
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145 </rdf:Description> |
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146 <rdf:BRSynth rdf:about="#_04b973bebf0de87c9fe23384ce8fd1fef71a33cbb0b827ade48cd364bf14a23a"> |
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147 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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148 <brsynth:smiles/> |
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149 <brsynth:inchi/> |
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150 <brsynth:inchikey/> |
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151 <brsynth:fba_biomass_shadow_price> |
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152 <brsynth:value value="None"/> |
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153 </brsynth:fba_biomass_shadow_price> |
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154 <brsynth:fba_fraction_shadow_price> |
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155 <brsynth:value value="None"/> |
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156 </brsynth:fba_fraction_shadow_price> |
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157 <brsynth:thermo_standard_dg_formation> |
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158 <brsynth:value value="-2236.551670011945"/> |
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159 <brsynth:units value="kilojoule / mole"/> |
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160 </brsynth:thermo_standard_dg_formation> |
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161 </brsynth:brsynth> |
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162 </rdf:BRSynth> |
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163 </rdf:RDF> |
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164 </annotation> |
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165 </species> |
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166 <species metaid="b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46" id="CMPD_0000000001" name="CMPD_0000000001" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
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167 <annotation> |
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168 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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169 <rdf:Description rdf:about="#b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46"> |
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170 <bqbiol:is> |
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171 <rdf:Bag/> |
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172 </bqbiol:is> |
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173 </rdf:Description> |
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174 <rdf:BRSynth rdf:about="#b0098569a07f786a6e9b2294639668cd4ee564dd642a38bdf429c4c6bb560b46"> |
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175 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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176 <brsynth:smiles value="[H]C(=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]"/> |
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177 <brsynth:inchi value="InChI=1S/C40H64/c1-33(2)19-13-23-37(7)27-17-31-39(9)29-15-25-35(5)21-11-12-22-36(6)26-16-30-40(10)32-18-28-38(8)24-14-20-34(3)4/h11-12,19-22,27-30H,13-18,23-26,31-32H2,1-10H3"/> |
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178 <brsynth:inchikey value="YVLPJIGOMTXXLP-UHFFFAOYSA-N"/> |
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179 <brsynth:fba_biomass_shadow_price> |
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180 <brsynth:value value="-0.46174576679638996"/> |
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181 </brsynth:fba_biomass_shadow_price> |
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182 <brsynth:fba_fraction_shadow_price> |
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183 <brsynth:value value="-1.0"/> |
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184 </brsynth:fba_fraction_shadow_price> |
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185 <brsynth:thermo_standard_dg_formation> |
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186 <brsynth:value value="936.7141451846444"/> |
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187 <brsynth:units value="kilojoule / mole"/> |
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188 </brsynth:thermo_standard_dg_formation> |
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189 </brsynth:brsynth> |
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190 </rdf:BRSynth> |
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191 </rdf:RDF> |
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192 </annotation> |
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193 </species> |
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194 <species metaid="_47d72a86d31940edf1cc42c7a7361a7a96211dc2a6679326b8ad27a7e216ada0" id="MNXM83" name="MNXM83" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
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195 <annotation> |
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196 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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197 <rdf:Description rdf:about="#_47d72a86d31940edf1cc42c7a7361a7a96211dc2a6679326b8ad27a7e216ada0"> |
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198 <bqbiol:is> |
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199 <rdf:Bag/> |
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200 </bqbiol:is> |
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201 </rdf:Description> |
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202 <rdf:BRSynth rdf:about="#_47d72a86d31940edf1cc42c7a7361a7a96211dc2a6679326b8ad27a7e216ada0"> |
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203 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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204 <brsynth:smiles value="[H]OP(=O)(O[H])OP(=O)(O[H])OC([H])([H])C([H])([H])C(=C([H])[H])C([H])([H])[H]"/> |
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205 <brsynth:inchi value="InChI=1S/C5H12O7P2/c1-5(2)3-4-11-14(9,10)12-13(6,7)8/h1,3-4H2,2H3,(H,9,10)(H2,6,7,8)"/> |
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206 <brsynth:inchikey value="NUHSROFQTUXZQQ-UHFFFAOYSA-N"/> |
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207 <brsynth:fba_biomass_shadow_price> |
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208 <brsynth:value value="None"/> |
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209 </brsynth:fba_biomass_shadow_price> |
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210 <brsynth:fba_fraction_shadow_price> |
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211 <brsynth:value value="None"/> |
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212 </brsynth:fba_fraction_shadow_price> |
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213 <brsynth:thermo_standard_dg_formation> |
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214 <brsynth:value value="-1828.3274439664424"/> |
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215 <brsynth:units value="kilojoule / mole"/> |
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216 </brsynth:thermo_standard_dg_formation> |
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217 </brsynth:brsynth> |
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218 </rdf:BRSynth> |
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219 </rdf:RDF> |
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220 </annotation> |
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221 </species> |
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222 <species metaid="a6e267be12defb7184259624f5adc519108c6c6adfe6be13f64b649567cb6df1" id="MNXM11" name="MNXM11" compartment="c" initialConcentration="1" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> |
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223 <annotation> |
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224 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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225 <rdf:Description rdf:about="#a6e267be12defb7184259624f5adc519108c6c6adfe6be13f64b649567cb6df1"> |
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226 <bqbiol:is> |
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227 <rdf:Bag/> |
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228 </bqbiol:is> |
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229 </rdf:Description> |
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230 <rdf:BRSynth rdf:about="#a6e267be12defb7184259624f5adc519108c6c6adfe6be13f64b649567cb6df1"> |
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231 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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232 <brsynth:smiles value="O=P(O)(O)OP(=O)(O)O"/> |
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233 <brsynth:inchi value="InChI=1S/H4O7P2/c1-8(2,3)7-9(4,5)6/h(H2,1,2,3)(H2,4,5,6)"/> |
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234 <brsynth:inchikey value="XPPKVPWEQAFLFU-UHFFFAOYSA-N"/> |
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235 <brsynth:fba_biomass_shadow_price> |
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236 <brsynth:value value="None"/> |
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237 </brsynth:fba_biomass_shadow_price> |
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238 <brsynth:fba_fraction_shadow_price> |
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239 <brsynth:value value="None"/> |
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240 </brsynth:fba_fraction_shadow_price> |
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241 <brsynth:thermo_standard_dg_formation> |
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242 <brsynth:value value="-1966.8036657706114"/> |
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243 <brsynth:units value="kilojoule / mole"/> |
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244 </brsynth:thermo_standard_dg_formation> |
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245 </brsynth:brsynth> |
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246 </rdf:BRSynth> |
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247 </rdf:RDF> |
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248 </annotation> |
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249 </species> |
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250 </listOfSpecies> |
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251 <listOfParameters> |
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252 <parameter metaid="dc937b59892604f5a86ac96936cd7ff09e25f18ae6b758e8014a24c7fa039e91" sboTerm="SBO:0000625" id="BRS_FBC_10000_0" value="10000" constant="true"/> |
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253 <parameter metaid="dc937b59892604f5a86ac96936cd7ff09e25f18ae6b758e8014a24c7fa039e91" sboTerm="SBO:0000625" id="BRS_FBC_0_0" value="0" constant="true"/> |
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254 </listOfParameters> |
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255 <listOfReactions> |
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256 <reaction metaid="_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4" sboTerm="SBO:0000176" id="rxn_1" reversible="false" fast="false" fbc:lowerFluxBound="BRS_FBC_0_0" fbc:upperFluxBound="BRS_FBC_10000_0"> |
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257 <annotation> |
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258 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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259 <rdf:Description rdf:about="#_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4"> |
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260 <bqbiol:is> |
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261 <rdf:Bag> |
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262 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.10"/> |
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263 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.68"/> |
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264 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.29"/> |
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265 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1"/> |
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266 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.-"/> |
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267 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.88"/> |
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268 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.81"/> |
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269 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.31"/> |
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270 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.84"/> |
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271 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.85"/> |
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272 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.92"/> |
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273 </rdf:Bag> |
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274 </bqbiol:is> |
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275 </rdf:Description> |
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276 <rdf:BRSynth rdf:about="#_7af1776cbbaecbf874d7f576d21891f6ad79e3b7c2e726cfd2ee9f5bd6f483c4"> |
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277 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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278 <brsynth:smiles value="[H]OP(=O)(O[H])OP(=O)(O[H])OC([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H].[H]OP(=O)(O[H])OP(=O)(O[H])OC([H])([H])C([H])([H])C(=C([H])[H])C([H])([H])[H]>>[H]OP(=O)(O[H])OP(=O)(O[H])OC([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H].O=P(O)(O)OP(=O)(O)O"/> |
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279 <brsynth:rp2_transfo_id value="TRS_0_2_742"/> |
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280 <brsynth:rule_ids> |
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281 <brsynth:RR-02-07adee9ac9c42c7d-14-F/> |
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282 <brsynth:RR-02-1494429c7e6e0694-14-F/> |
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283 <brsynth:RR-02-1d50852f3f343682-14-F/> |
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284 <brsynth:RR-02-3bf131230c6b2bf2-14-F/> |
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285 <brsynth:RR-02-58d0f0d25e47b74a-14-F/> |
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286 <brsynth:RR-02-b3db29f084fc7a81-14-F/> |
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287 <brsynth:RR-02-f9759fe03c57b29f-14-F/> |
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288 </brsynth:rule_ids> |
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289 <brsynth:tmpl_rxn_ids> |
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290 <brsynth:MNXR100137/> |
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291 <brsynth:MNXR112247/> |
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292 <brsynth:MNXR116653/> |
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293 <brsynth:MNXR100621/> |
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294 <brsynth:MNXR99634/> |
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295 <brsynth:MNXR112069/> |
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296 <brsynth:MNXR99650/> |
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297 <brsynth:MNXR109677/> |
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298 <brsynth:MNXR113141/> |
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299 <brsynth:MNXR105052/> |
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300 <brsynth:MNXR109713/> |
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301 <brsynth:MNXR110950/> |
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302 <brsynth:MNXR110952/> |
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303 <brsynth:MNXR112246/> |
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304 <brsynth:MNXR112250/> |
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305 <brsynth:MNXR112251/> |
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306 <brsynth:MNXR112252/> |
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307 <brsynth:MNXR116656/> |
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308 <brsynth:MNXR117266/> |
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309 <brsynth:MNXR139515/> |
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310 <brsynth:MNXR139637/> |
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311 <brsynth:MNXR112249/> |
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312 <brsynth:MNXR116655/> |
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313 <brsynth:MNXR103150/> |
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314 <brsynth:MNXR112248/> |
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315 <brsynth:MNXR116654/> |
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316 </brsynth:tmpl_rxn_ids> |
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317 <brsynth:rule_score value="0.7358363677022237"/> |
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318 <brsynth:idx_in_path value="1"/> |
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319 <brsynth:selenzy/> |
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320 <brsynth:fba_biomass> |
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321 <brsynth:value value="0.0"/> |
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322 <brsynth:units value="gDW / gDW / hour"/> |
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323 </brsynth:fba_biomass> |
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324 <brsynth:fba_fraction> |
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325 <brsynth:value value="0.47418756101676524"/> |
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326 <brsynth:units value="milimole / gDW / hour"/> |
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327 </brsynth:fba_fraction> |
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328 <brsynth:thermo_dG0_prime> |
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329 <brsynth:value value="-71.55654770059041"/> |
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330 <brsynth:error value="2.9407032504945367"/> |
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331 <brsynth:units value="kilojoule / mole"/> |
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332 </brsynth:thermo_dG0_prime> |
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333 <brsynth:thermo_dGm_prime> |
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334 <brsynth:value value="-71.55654770059041"/> |
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335 <brsynth:error value="2.9407032504945367"/> |
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336 <brsynth:units value="kilojoule / mole"/> |
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337 </brsynth:thermo_dGm_prime> |
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338 <brsynth:thermo_dG_prime> |
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339 <brsynth:value value="-71.55654770059041"/> |
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340 <brsynth:error value="2.9407032504945367"/> |
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341 <brsynth:units value="kilojoule / mole"/> |
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342 </brsynth:thermo_dG_prime> |
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343 <brsynth:thermo_dG> |
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344 <brsynth:value value="-26.40520582450108"/> |
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345 <brsynth:error value="2.9407032504945367"/> |
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346 <brsynth:units value="kilojoule / mole"/> |
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347 </brsynth:thermo_dG> |
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348 </brsynth:brsynth> |
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349 </rdf:BRSynth> |
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350 </rdf:RDF> |
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351 </annotation> |
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|
352 <listOfReactants> |
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|
353 <speciesReference species="MNXM34" stoichiometry="1" constant="true"/> |
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354 <speciesReference species="MNXM83" stoichiometry="1" constant="true"/> |
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|
355 </listOfReactants> |
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356 <listOfProducts> |
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|
357 <speciesReference species="CMPD_0000000003" stoichiometry="1" constant="true"/> |
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358 <speciesReference species="MNXM11" stoichiometry="1" constant="true"/> |
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359 </listOfProducts> |
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360 </reaction> |
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|
361 <reaction metaid="c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff" sboTerm="SBO:0000176" id="rxn_2" reversible="false" fast="false" fbc:lowerFluxBound="BRS_FBC_0_0" fbc:upperFluxBound="BRS_FBC_10000_0"> |
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|
362 <annotation> |
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363 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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364 <rdf:Description rdf:about="#c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff"> |
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365 <bqbiol:is> |
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366 <rdf:Bag> |
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367 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.96"/> |
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368 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.99"/> |
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369 <rdf:li rdf:resource="http://identifiers.org/ec-code/2.5.1.32"/> |
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370 </rdf:Bag> |
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371 </bqbiol:is> |
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372 </rdf:Description> |
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373 <rdf:BRSynth rdf:about="#c9c2d56fd0ad9d5b8cd80acad4b5df22945ab4de50db7b24db52a91a7560c3ff"> |
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374 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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375 <brsynth:smiles value="[H]OP(=O)(O[H])OP(=O)(O[H])OC([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]>>[H]C(=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H].O=P(O)(O)OP(=O)(O)O.O=P(O)(O)OP(=O)(O)O"/> |
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|
376 <brsynth:rp2_transfo_id value="TRS_0_1_9"/> |
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377 <brsynth:rule_ids> |
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378 <brsynth:RR-02-bedda4e2f5001e0c-14-F/> |
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379 </brsynth:rule_ids> |
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380 <brsynth:tmpl_rxn_ids> |
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381 <brsynth:MNXR111250/> |
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382 <brsynth:MNXR111499/> |
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383 <brsynth:MNXR113543/> |
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384 <brsynth:MNXR118024/> |
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385 <brsynth:MNXR139549/> |
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386 </brsynth:tmpl_rxn_ids> |
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387 <brsynth:rule_score value="0.5518755963407151"/> |
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|
388 <brsynth:idx_in_path value="2"/> |
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389 <brsynth:selenzy/> |
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390 <brsynth:fba_biomass> |
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391 <brsynth:value value="0.0"/> |
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392 <brsynth:units value="gDW / gDW / hour"/> |
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393 </brsynth:fba_biomass> |
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394 <brsynth:fba_fraction> |
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395 <brsynth:value value="0.47418756101676524"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
396 <brsynth:units value="milimole / gDW / hour"/> |
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397 </brsynth:fba_fraction> |
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398 <brsynth:thermo_dG0_prime> |
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|
399 <brsynth:value value="-119.13360567395966"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
400 <brsynth:error value="11.000567449695138"/> |
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|
401 <brsynth:units value="kilojoule / mole"/> |
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402 </brsynth:thermo_dG0_prime> |
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403 <brsynth:thermo_dGm_prime> |
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404 <brsynth:value value="-153.36328074340173"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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405 <brsynth:error value="11.000567449695138"/> |
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406 <brsynth:units value="kilojoule / mole"/> |
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407 </brsynth:thermo_dGm_prime> |
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408 <brsynth:thermo_dG_prime> |
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409 <brsynth:value value="-119.13360567395966"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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410 <brsynth:error value="11.000567449695138"/> |
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411 <brsynth:units value="kilojoule / mole"/> |
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412 </brsynth:thermo_dG_prime> |
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413 <brsynth:thermo_dG> |
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414 <brsynth:value value="-1501.0650763644926"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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415 <brsynth:error value="11.000567449695138"/> |
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416 <brsynth:units value="kilojoule / mole"/> |
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417 </brsynth:thermo_dG> |
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418 </brsynth:brsynth> |
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419 </rdf:BRSynth> |
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420 </rdf:RDF> |
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421 </annotation> |
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422 <listOfReactants> |
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423 <speciesReference species="CMPD_0000000003" stoichiometry="1" constant="true"/> |
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424 </listOfReactants> |
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425 <listOfProducts> |
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426 <speciesReference species="CMPD_0000000001" stoichiometry="1" constant="true"/> |
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427 <speciesReference species="MNXM11" stoichiometry="2" constant="true"/> |
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428 </listOfProducts> |
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429 </reaction> |
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|
430 <reaction metaid="_376841fa42ba139764a5509b9d817e2e540d0e228582c970025c73ae1ee77c0d" sboTerm="SBO:0000176" id="rxn_3" reversible="false" fast="false" fbc:lowerFluxBound="BRS_FBC_0_0" fbc:upperFluxBound="BRS_FBC_10000_0"> |
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431 <annotation> |
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432 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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433 <rdf:Description rdf:about="#_376841fa42ba139764a5509b9d817e2e540d0e228582c970025c73ae1ee77c0d"> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
434 <bqbiol:is> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
435 <rdf:Bag> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
436 <rdf:li rdf:resource="http://identifiers.org/ec-code/1.3.99.31"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
437 </rdf:Bag> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
438 </bqbiol:is> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
439 </rdf:Description> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
440 <rdf:BRSynth rdf:about="#_376841fa42ba139764a5509b9d817e2e540d0e228582c970025c73ae1ee77c0d"> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
441 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
442 <brsynth:smiles value="[H]C(=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H]>>[H]C(=C([H])C([H])=C(C([H])=C([H])C([H])=C(C([H])=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])=C(C([H])=C([H])C([H])=C(C([H])=C([H])C([H])=C(C([H])([H])[H])C([H])([H])C([H])([H])C([H])=C(C([H])([H])[H])C([H])([H])[H])C([H])([H])[H])C([H])([H])[H]"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
443 <brsynth:rp2_transfo_id value="TRS_0_0_1"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
444 <brsynth:rule_ids> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
445 <brsynth:RR-02-ae41ec5771136ea5-14-F/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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446 </brsynth:rule_ids> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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447 <brsynth:tmpl_rxn_ids> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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448 <brsynth:MNXR117536/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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449 </brsynth:tmpl_rxn_ids> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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450 <brsynth:rule_score value="0.7358363677022237"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
451 <brsynth:idx_in_path value="3"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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452 <brsynth:selenzy/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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453 <brsynth:fba_biomass> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
454 <brsynth:value value="0.0"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
455 <brsynth:units value="gDW / gDW / hour"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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456 </brsynth:fba_biomass> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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457 <brsynth:fba_fraction> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
458 <brsynth:value value="0.47418756101676524"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
459 <brsynth:units value="milimole / gDW / hour"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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460 </brsynth:fba_fraction> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
461 <brsynth:thermo_dG0_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
462 <brsynth:value value="225.28622017594057"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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|
463 <brsynth:error value="5.600796500160482"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
464 <brsynth:units value="kilojoule / mole"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
465 </brsynth:thermo_dG0_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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466 <brsynth:thermo_dGm_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
467 <brsynth:value value="225.28622017594057"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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|
468 <brsynth:error value="5.600796500160482"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
469 <brsynth:units value="kilojoule / mole"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
470 </brsynth:thermo_dGm_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
471 <brsynth:thermo_dG_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
472 <brsynth:value value="225.28622017594057"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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|
473 <brsynth:error value="5.600796500160482"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
474 <brsynth:units value="kilojoule / mole"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
475 </brsynth:thermo_dG_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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476 <brsynth:thermo_dG> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
477 <brsynth:value value="408.1812115547325"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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|
478 <brsynth:error value="5.600796500160482"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
479 <brsynth:units value="kilojoule / mole"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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480 </brsynth:thermo_dG> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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481 </brsynth:brsynth> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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482 </rdf:BRSynth> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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483 </rdf:RDF> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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484 </annotation> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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485 <listOfReactants> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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486 <speciesReference species="CMPD_0000000001" stoichiometry="1" constant="true"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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487 <speciesReference species="MNXM8975" stoichiometry="4" constant="true"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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488 </listOfReactants> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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489 <listOfProducts> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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490 <speciesReference species="MNXM36" stoichiometry="4" constant="true"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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491 <speciesReference species="TARGET_0000000001" stoichiometry="1" constant="true"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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492 </listOfProducts> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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493 </reaction> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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494 </listOfReactions> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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495 <groups:listOfGroups> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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496 <groups:group metaid="_93eef40c447d295fa61df9270c5fd909ec2ba7ee9883090552c0466873cd4299" groups:id="rp_pathway" groups:kind="collection"> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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497 <annotation> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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498 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
499 <rdf:BRSynth rdf:about="#_93eef40c447d295fa61df9270c5fd909ec2ba7ee9883090552c0466873cd4299"> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
500 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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501 <brsynth:fba_biomass> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
502 <brsynth:value value="0.8769972144269658"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
503 <brsynth:units value="gDW / gDW / hour"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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504 </brsynth:fba_biomass> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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505 <brsynth:fba_fraction> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
506 <brsynth:value value="0.47418756101676524"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
507 <brsynth:units value="milimole / gDW / hour"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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508 </brsynth:fba_fraction> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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509 <brsynth:thermo_dG0_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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|
510 <brsynth:value value="34.59606680139291"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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|
511 <brsynth:error value="15.773628149777156"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
512 <brsynth:units value="kilojoule / mole"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
513 </brsynth:thermo_dG0_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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514 <brsynth:thermo_dGm_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
515 <brsynth:value value="0.3663917319508414"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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|
516 <brsynth:error value="15.773628149777156"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
517 <brsynth:units value="kilojoule / mole"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
518 </brsynth:thermo_dGm_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
519 <brsynth:thermo_dG_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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|
520 <brsynth:value value="34.59606680139291"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
521 <brsynth:error value="15.773628149777156"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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|
522 <brsynth:units value="kilojoule / mole"/> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
523 </brsynth:thermo_dG_prime> |
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"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
524 <brsynth:thermo_dG> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
525 <brsynth:value value="-1119.2890706342598"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
526 <brsynth:error value="15.773628149777156"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
527 <brsynth:units value="kilojoule / mole"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
528 </brsynth:thermo_dG> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
529 <brsynth:global_score value="0.980250358581543"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
530 </brsynth:brsynth> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
531 </rdf:BRSynth> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
532 </rdf:RDF> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
533 </annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
534 <groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
535 <groups:member groups:idRef="rxn_1"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
536 <groups:member groups:idRef="rxn_2"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
537 <groups:member groups:idRef="rxn_3"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
538 </groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
539 </groups:group> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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changeset
|
540 <groups:group metaid="_613b064337553014ede418c67180137a4561ff11b13f3bfa1a2765ef37ac375a" groups:id="rp_intermediate_species" groups:kind="collection"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
541 <annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
542 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
543 <rdf:BRSynth rdf:about="#_613b064337553014ede418c67180137a4561ff11b13f3bfa1a2765ef37ac375a"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
544 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
545 </rdf:BRSynth> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
546 </rdf:RDF> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
547 </annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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changeset
|
548 <groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
549 <groups:member groups:idRef="CMPD_0000000001"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
550 <groups:member groups:idRef="CMPD_0000000003"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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changeset
|
551 </groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
552 </groups:group> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
553 <groups:group metaid="_564fce39b23c6cf87d12dc2c612448384fd2cd980fe3fc07829e2ef802645579" groups:id="rp_trunk_species" groups:kind="collection"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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changeset
|
554 <annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
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parents:
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changeset
|
555 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
556 <rdf:BRSynth rdf:about="#_564fce39b23c6cf87d12dc2c612448384fd2cd980fe3fc07829e2ef802645579"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
557 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
558 </rdf:BRSynth> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
559 </rdf:RDF> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
560 </annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
561 <groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
562 <groups:member groups:idRef="CMPD_0000000003"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
563 <groups:member groups:idRef="MNXM34"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
564 <groups:member groups:idRef="TARGET_0000000001"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
565 <groups:member groups:idRef="CMPD_0000000001"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
566 <groups:member groups:idRef="MNXM83"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
567 </groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
568 </groups:group> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
569 <groups:group metaid="_9e3154173c97366b3980dd1642e1e35d0bdfc3274abc744e89ecb518bcd48378" groups:id="rp_completed_species" groups:kind="collection"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
570 <annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
571 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
572 <rdf:BRSynth rdf:about="#_9e3154173c97366b3980dd1642e1e35d0bdfc3274abc744e89ecb518bcd48378"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
573 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
574 </rdf:BRSynth> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
575 </rdf:RDF> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
576 </annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
577 <groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
578 <groups:member groups:idRef="MNXM8975"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
579 <groups:member groups:idRef="MNXM36"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
580 <groups:member groups:idRef="MNXM11"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
581 </groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
582 </groups:group> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
583 <groups:group metaid="_58b3b59284e0d918d6d3f3bcadc2d757726da7594cd899cad4e745836ac967a3" groups:id="rp_sink_species" groups:kind="collection"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
584 <annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
585 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
diff
changeset
|
586 <rdf:BRSynth rdf:about="#_58b3b59284e0d918d6d3f3bcadc2d757726da7594cd899cad4e745836ac967a3"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
587 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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|
588 </rdf:BRSynth> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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|
589 </rdf:RDF> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
590 </annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
591 <groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
592 <groups:member groups:idRef="MNXM83"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
593 <groups:member groups:idRef="MNXM11"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
594 <groups:member groups:idRef="MNXM34"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
595 </groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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|
596 </groups:group> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
597 <groups:group metaid="a0f48a6fe4f833a3d15abd7ee5b944b97d629570ac09588e9fb6fdf6196ab189" groups:id="rp_fba_ignored_species" groups:kind="collection"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
598 <annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
599 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
600 <rdf:BRSynth rdf:about="#a0f48a6fe4f833a3d15abd7ee5b944b97d629570ac09588e9fb6fdf6196ab189"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
601 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
602 </rdf:BRSynth> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
603 </rdf:RDF> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
604 </annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
605 <groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
606 <groups:member groups:idRef="MNXM8975"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
607 <groups:member groups:idRef="MNXM36"/> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
608 </groups:listOfMembers> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
609 </groups:group> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
610 <groups:group metaid="fb9b29ba20af773fed953f1d6726905a453f235c9a4baa7217f02760bc2057f8" groups:id="rp_thermo_substituted_species" groups:kind="collection"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
611 <annotation> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
612 <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
parents:
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changeset
|
613 <rdf:BRSynth rdf:about="#fb9b29ba20af773fed953f1d6726905a453f235c9a4baa7217f02760bc2057f8"> |
e95370d2e5f9
"planemo upload commit 2f1af427fa4c4f2aad53ab94c4cdb51456c66019-dirty"
tduigou
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614 <brsynth:brsynth xmlns:brsynth="http://brsynth.eu"/> |
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615 </rdf:BRSynth> |
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616 </rdf:RDF> |
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617 </annotation> |
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618 <groups:listOfMembers> |
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619 <groups:member groups:idRef="TARGET_0000000001"/> |
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620 <groups:member groups:idRef="MNXM8975"/> |
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621 <groups:member groups:idRef="MNXM36"/> |
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622 </groups:listOfMembers> |
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623 </groups:group> |
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624 </groups:listOfGroups> |
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625 </model> |
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626 </sbml> |