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planemo upload commit 3bc34bfc82850daa2229724c396dcd9454039273-dirty
author tduigou
date Fri, 18 Nov 2022 16:04:21 +0000
parents e95370d2e5f9
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<?xml version="1.0" encoding="UTF-8"?>
<sbml xmlns="http://www.sbml.org/sbml/level3/version1/core" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1" xmlns:fbc="http://www.sbml.org/sbml/level3/version1/fbc/version2" level="3" version="1" groups:required="false" fbc:required="false">
  <model metaid="ab7a7ab71c6ccfe1bb89180d9a6fb504a8ea4784c1ace396ce99cb6892d1b81e" id="RP_model_003_0261" name="003_0261" substanceUnits="mole" timeUnits="second" extentUnits="mole" fbc:strict="true">
    <listOfCompartments>
      <compartment metaid="_2e7d2c03a9507ae265ecf5b5356885a53393a2029d241394997265a1a25aefc6" sboTerm="SBO:0000290" id="c" name="cytosol" size="1" constant="true">
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              <bqbiol:is>
                <rdf:Bag>
                  <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c"/>
                  <rdf:li rdf:resource="http://identifiers.org/bigg.compartment/c_c"/>
                  <rdf:li rdf:resource="http://identifiers.org/metanetx.compartment/MNXC3"/>
                  <rdf:li rdf:resource="http://identifiers.org/seed/c"/>
                  <rdf:li rdf:resource="http://identifiers.org/seed/c0"/>
                  <rdf:li rdf:resource="http://identifiers.org/seed/cytosol"/>
                  <rdf:li rdf:resource="http://identifiers.org/name/cytosol"/>
                </rdf:Bag>
              </bqbiol:is>
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                <brsynth:thermo_standard_dg_formation>
                  <brsynth:value value="-1607.8991259717538"/>
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                <brsynth:thermo_standard_dg_formation>
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                <brsynth:fba_fraction_shadow_price>
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                <brsynth:thermo_standard_dg_formation>
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                  <brsynth:units value="kilojoule / mole"/>
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              </brsynth:brsynth>
            </rdf:BRSynth>
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        </annotation>
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        </annotation>
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            </rdf:BRSynth>
          </rdf:RDF>
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    </listOfSpecies>
    <listOfParameters>
      <parameter metaid="dc937b59892604f5a86ac96936cd7ff09e25f18ae6b758e8014a24c7fa039e91" sboTerm="SBO:0000625" id="BRS_FBC_10000_0" value="10000" constant="true"/>
      <parameter metaid="dc937b59892604f5a86ac96936cd7ff09e25f18ae6b758e8014a24c7fa039e91" sboTerm="SBO:0000625" id="BRS_FBC_0_0" value="0" constant="true"/>
    </listOfParameters>
    <listOfReactions>
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                  <brsynth:MNXR112069/>
                  <brsynth:MNXR99650/>
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                  <brsynth:MNXR113141/>
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                  <brsynth:MNXR109713/>
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                  <brsynth:MNXR112250/>
                  <brsynth:MNXR112251/>
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                  <brsynth:MNXR139515/>
                  <brsynth:MNXR139637/>
                  <brsynth:MNXR112249/>
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                  <brsynth:MNXR103150/>
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                </brsynth:fba_biomass>
                <brsynth:fba_fraction>
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                <brsynth:thermo_dG_prime>
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                </brsynth:thermo_dG_prime>
                <brsynth:thermo_dG>
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                </brsynth:thermo_dG>
              </brsynth:brsynth>
            </rdf:BRSynth>
          </rdf:RDF>
        </annotation>
        <listOfReactants>
          <speciesReference species="MNXM34" stoichiometry="1" constant="true"/>
          <speciesReference species="MNXM83" stoichiometry="1" constant="true"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="CMPD_0000000003" stoichiometry="1" constant="true"/>
          <speciesReference species="MNXM11" stoichiometry="1" constant="true"/>
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      </reaction>
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                <brsynth:fba_fraction>
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                <brsynth:thermo_dG0_prime>
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                  <brsynth:units value="kilojoule / mole"/>
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                <brsynth:thermo_dGm_prime>
                  <brsynth:value value="-153.36328074340173"/>
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                <brsynth:thermo_dG_prime>
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                  <brsynth:units value="kilojoule / mole"/>
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                <brsynth:thermo_dG>
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                </brsynth:thermo_dG>
              </brsynth:brsynth>
            </rdf:BRSynth>
          </rdf:RDF>
        </annotation>
        <listOfReactants>
          <speciesReference species="CMPD_0000000003" stoichiometry="1" constant="true"/>
        </listOfReactants>
        <listOfProducts>
          <speciesReference species="CMPD_0000000001" stoichiometry="1" constant="true"/>
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      </reaction>
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        </annotation>
        <listOfReactants>
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        <listOfProducts>
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    </listOfReactions>
    <groups:listOfGroups>
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    </groups:listOfGroups>
  </model>
</sbml>