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view test-data/sbol_lycopene_output.xml @ 2:9b3279f37e41 draft

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planemo upload for repository https://github.com/neilswainston/SbmlToSbol commit 2e8aa2e7c0581c7eed2074d15f7e4317ecde2ad6
author tduigou
date Mon, 01 May 2023 01:31:11 +0000
parents f0a06f526c7f
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<?xml version="1.0" ?>
<rdf:RDF xmlns:sys-bio="http://sys-bio.org#" xmlns:sbol="http://sbols.org/v2#" xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:prov="http://www.w3.org/ns/prov#">
  <sbol:ComponentDefinition rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_30000_rbs/1">
    <sbol:displayId>P21687_30000_rbs</sbol:displayId>
    <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_30000_rbs"/>
    <sbol:role rdf:resource="http://identifiers.org/so/SO:0000139"/>
    <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
    <sbol:version>1</sbol:version>
  </sbol:ComponentDefinition>
  <sbol:ComponentDefinition rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/1">
    <sbol:displayId>P21687_10000_gene</sbol:displayId>
    <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene"/>
    <sbol:role rdf:resource="http://identifiers.org/so/SO:0000704"/>
    <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
    <sbol:type rdf:resource="http://identifiers.org/so/SO:0000987"/>
    <sbol:version>1</sbol:version>
    <sbol:component>
      <sbol:Component rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_5_prime_assembly_0/1">
        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_5_prime_assembly/1"/>
        <sbol:displayId>rxn_3_5_prime_assembly_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_5_prime_assembly_0"/>
        <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
        <sbol:version>1</sbol:version>
      </sbol:Component>
    </sbol:component>
    <sbol:component>
      <sbol:Component rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_rbs_0/1">
        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_rbs/1"/>
        <sbol:displayId>P21687_10000_rbs_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_rbs_0"/>
        <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
        <sbol:version>1</sbol:version>
      </sbol:Component>
    </sbol:component>
    <sbol:component>
      <sbol:Component rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_cds_0/1">
        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_cds/1"/>
        <sbol:displayId>P21687_10000_cds_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_cds_0"/>
        <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
        <sbol:version>1</sbol:version>
      </sbol:Component>
    </sbol:component>
    <sbol:component>
      <sbol:Component rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_3_prime_assembly_0/1">
        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_3_prime_assembly/1"/>
        <sbol:displayId>rxn_3_3_prime_assembly_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_3_prime_assembly_0"/>
        <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
        <sbol:version>1</sbol:version>
      </sbol:Component>
    </sbol:component>
    <sbol:sequenceConstraint>
      <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_0/1">
        <sbol:displayId>constraint_0</sbol:displayId>
        <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_rbs_0/1"/>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_0"/>
        <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
        <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_5_prime_assembly_0/1"/>
        <sbol:version>1</sbol:version>
      </sbol:SequenceConstraint>
    </sbol:sequenceConstraint>
    <sbol:sequenceConstraint>
      <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_1/1">
        <sbol:displayId>constraint_1</sbol:displayId>
        <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_cds_0/1"/>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_1"/>
        <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
        <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_rbs_0/1"/>
        <sbol:version>1</sbol:version>
      </sbol:SequenceConstraint>
    </sbol:sequenceConstraint>
    <sbol:sequenceConstraint>
      <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_2/1">
        <sbol:displayId>constraint_2</sbol:displayId>
        <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/rxn_3_3_prime_assembly_0/1"/>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/constraint_2"/>
        <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
        <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_gene/P21687_10000_cds_0/1"/>
        <sbol:version>1</sbol:version>
      </sbol:SequenceConstraint>
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    <sbol:displayId>P21687_10000_cds</sbol:displayId>
    <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_cds"/>
    <sbol:role rdf:resource="http://identifiers.org/so/SO:0000316"/>
    <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
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    <sbol:displayId>P21687_10000_rbs</sbol:displayId>
    <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21687_10000_rbs"/>
    <sbol:role rdf:resource="http://identifiers.org/so/SO:0000139"/>
    <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
    <sbol:version>1</sbol:version>
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    <sbol:displayId>P21685_30000_gene</sbol:displayId>
    <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene"/>
    <sbol:role rdf:resource="http://identifiers.org/so/SO:0000704"/>
    <sbol:type rdf:resource="http://www.biopax.org/release/biopax-level3.owl#DnaRegion"/>
    <sbol:type rdf:resource="http://identifiers.org/so/SO:0000987"/>
    <sbol:version>1</sbol:version>
    <sbol:component>
      <sbol:Component rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_5_prime_assembly_0/1">
        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_5_prime_assembly/1"/>
        <sbol:displayId>rxn_3_5_prime_assembly_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_5_prime_assembly_0"/>
        <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
        <sbol:version>1</sbol:version>
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    <sbol:component>
      <sbol:Component rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_rbs_0/1">
        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_rbs/1"/>
        <sbol:displayId>P21685_30000_rbs_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_rbs_0"/>
        <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_cds/1"/>
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    <sbol:component>
      <sbol:Component rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_3_prime_assembly_0/1">
        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_3_prime_assembly/1"/>
        <sbol:displayId>rxn_3_3_prime_assembly_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_3_prime_assembly_0"/>
        <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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    <sbol:sequenceConstraint>
      <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_0/1">
        <sbol:displayId>constraint_0</sbol:displayId>
        <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_rbs_0/1"/>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_0"/>
        <sbol:restriction rdf:resource="http://sbols.org/v2#precedes"/>
        <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_5_prime_assembly_0/1"/>
        <sbol:version>1</sbol:version>
      </sbol:SequenceConstraint>
    </sbol:sequenceConstraint>
    <sbol:sequenceConstraint>
      <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_1/1">
        <sbol:displayId>constraint_1</sbol:displayId>
        <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_cds_0/1"/>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_1"/>
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        <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_rbs_0/1"/>
        <sbol:version>1</sbol:version>
      </sbol:SequenceConstraint>
    </sbol:sequenceConstraint>
    <sbol:sequenceConstraint>
      <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_2/1">
        <sbol:displayId>constraint_2</sbol:displayId>
        <sbol:object rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/rxn_3_3_prime_assembly_0/1"/>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/constraint_2"/>
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        <sbol:subject rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_30000_gene/P21685_30000_cds_0/1"/>
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    <sbol:displayId>P21685_20000_gene</sbol:displayId>
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        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_5_prime_assembly/1"/>
        <sbol:displayId>rxn_3_5_prime_assembly_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/rxn_3_5_prime_assembly_0"/>
        <sbol:roleIntegration rdf:resource="http://sbols.org/v2#mergeRoles"/>
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        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
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        <sbol:access rdf:resource="http://sbols.org/v2#public"/>
        <sbol:definition rdf:resource="http://liverpool.ac.uk/ComponentDefinition/rxn_3_3_prime_assembly/1"/>
        <sbol:displayId>rxn_3_3_prime_assembly_0</sbol:displayId>
        <sbol:persistentIdentity rdf:resource="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/rxn_3_3_prime_assembly_0"/>
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    <sbol:sequenceConstraint>
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    <sbol:sequenceConstraint>
      <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/constraint_1/1">
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      <sbol:SequenceConstraint rdf:about="http://liverpool.ac.uk/ComponentDefinition/P21685_20000_gene/constraint_2/1">
        <sbol:displayId>constraint_2</sbol:displayId>
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